Pairwise Alignments

Query, 398 a.a., general secretion pathway protein GspF from Pseudomonas simiae WCS417

Subject, 402 a.a., Type 4 fimbrial assembly protein PilC from Pseudomonas putida KT2440

 Score =  182 bits (461), Expect = 2e-50
 Identities = 119/397 (29%), Positives = 200/397 (50%), Gaps = 2/397 (0%)

Query: 3   LFKFRALDSQGVPQNGTLEAVDQVAAVAALHKRGLLLLQIEAAGSPLLRNPRGQLKGAAL 62
           L+ +   D+ G P +G           A L ++G+ +  +  A       P+ + K A  
Sbjct: 7   LYHWHGTDANGAPVSGQTPGRSPAYVRAGLIRQGITVASLRPASGLAFSLPKRREK-ADP 65

Query: 63  VSFTQQLATLLGAGQPLERSLSLLLKQPGQPQVRALIGRIRDHVKAGKPLSAALEEEGGS 122
             F++QLATLL AG PL ++  ++ +        AL+ R++  V +G  L+ AL+     
Sbjct: 66  AGFSRQLATLLKAGVPLLQAFEVMGRSGCDAAQAALLERLKQDVASGLGLADALQRHPAW 125

Query: 123 FSPLYLSMVRAGEAGGALENTLRQLSDYLERSERLRGEVINALIYPAFLVVGVLGSLALL 182
           F  LY ++VR GE  G L+  L QL+  LE+   L  +V  A+IYP  L++  LG  A+L
Sbjct: 126 FDALYCNLVRVGEQSGTLDRQLEQLAGMLEQRRVLHKKVRKAMIYPLLLLLTGLGVSAIL 185

Query: 183 LAYVVPQFVPIFQDLGVPIPWITEVILALGEFLGAYG-LLVLAGLIVSGGCWAARLRNPA 241
           L  V+P+F  +F  +G  +P  T+ ++ L   L  +  LL++ G+++         ++  
Sbjct: 186 LLEVIPKFESMFSGMGAALPAFTQWVINLSTGLSRFAPLLLVMGVVMGVAVRQLYRQHAP 245

Query: 242 FREQYDRRLLGVRGIGPLLQRVEAARLTRTLGTLLSNGVALLQALVIARQVCTNRALQAQ 301
            R    RR+LG+   G LL +   AR  R+L T    GV LL AL    +V      +  
Sbjct: 246 ARLWISRRVLGLPVFGKLLGQAALARFARSLATSYGAGVPLLDALGTVARVTGGDLHEQA 305

Query: 302 VGSAAESVKGGGTLASAFGSQPLLPELALQMIEVGEQAGELDSMLLKVADIFDVEAKRGI 361
           V    + +  G  L  A   +PL P L +Q+  +GE +G LD ML K A  ++ +  + +
Sbjct: 306 VLRLRQGMANGQGLNQAMAGEPLFPPLLVQLTAIGESSGTLDQMLEKAASHYEEQVSQAL 365

Query: 362 DRLLAALVPSLTVVMAVLVAVIMLAIMLPLMSLTSNI 398
           D+L + L P++ +++ +LV  +++A+ LP+  L S I
Sbjct: 366 DQLTSLLEPAIVLILGLLVGGLVVAMYLPIFQLGSLI 402