Pairwise Alignments

Query, 398 a.a., general secretion pathway protein GspF from Pseudomonas simiae WCS417

Subject, 408 a.a., type II secretion system inner membrane protein GspF from Dickeya dianthicola ME23

 Score =  210 bits (535), Expect = 5e-59
 Identities = 137/404 (33%), Positives = 220/404 (54%), Gaps = 8/404 (1%)

Query: 1   MSLFKFRALDSQGVPQNGTLEAVDQVAAVAALHKRGLLLLQIEA--------AGSPLLRN 52
           M+LF+++AL++QG    G  EA     A   L ++GL+ ++IE         +G  L   
Sbjct: 1   MALFQYQALNAQGKKSQGMQEADSARHARQLLREKGLVPVKIEEQRGEVTSRSGFSLSLR 60

Query: 53  PRGQLKGAALVSFTQQLATLLGAGQPLERSLSLLLKQPGQPQVRALIGRIRDHVKAGKPL 112
              ++  + L   T+QLATL+ A  PLE +L  + KQ  +P++ AL+  +R  V  G  L
Sbjct: 61  RSHRISASDLALLTRQLATLVAAALPLEEALDAVAKQSEKPKLSALMAAVRAKVVEGHSL 120

Query: 113 SAALEEEGGSFSPLYLSMVRAGEAGGALENTLRQLSDYLERSERLRGEVINALIYPAFLV 172
           + A+    GSF  LY +MV AGEA G L+  L +L+DY E+ +++R  +  A+IYP  L 
Sbjct: 121 AEAMGNFPGSFERLYCAMVAAGEASGHLDAVLNRLADYTEQRQQMRSRIQQAMIYPCVLT 180

Query: 173 VGVLGSLALLLAYVVPQFVPIFQDLGVPIPWITEVILALGEFLGAYGLLVLAGLIVSGGC 232
           +  +  +++LL+ VVP+ V  F  +   +P  T +++ + + + +YG  V+  L+++   
Sbjct: 181 LVAISVVSILLSAVVPKVVEQFIHMKQALPLSTRLLMGVSDAVRSYGPWVVVLLVLAVMG 240

Query: 233 WAARLRNPAFREQYDRRLLGVRGIGPLLQRVEAARLTRTLGTLLSNGVALLQALVIARQV 292
           +   LR    R  + RRLL +  IG + + +  AR  RTL  L S+ V LLQA+ I+  V
Sbjct: 241 FRVLLRQEKHRLVFHRRLLFLPLIGRIARGLNTARYARTLSILNSSAVPLLQAMRISGDV 300

Query: 293 CTNRALQAQVGSAAESVKGGGTLASAFGSQPLLPELALQMIEVGEQAGELDSMLLKVADI 352
            TN   + ++G A ++V+ G +L  A     L P +   MI  GE++GELD ML + AD 
Sbjct: 301 LTNDYARFRLGQATDAVREGVSLNKALEQTSLFPPMMRHMIASGERSGELDGMLTRAADN 360

Query: 353 FDVEAKRGIDRLLAALVPSLTVVMAVLVAVIMLAIMLPLMSLTS 396
            D E    +   L    P L V MA +V  I+LAI+ P++ L +
Sbjct: 361 QDREFSAQMTLALGLFEPLLVVSMAGIVLFIVLAILQPILQLNT 404