Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 264 a.a., periplasmic cystine-binding protein from Pseudomonas putida KT2440

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 71/264 (26%), Positives = 131/264 (49%), Gaps = 14/264 (5%)

Query: 1   MSKSYCSALLLSAVALIHMGLAQAGAIDDAVR----RGVLKVGTTPTYVPFEMTDKQGRI 56
           MSK     L  S   L+  GL       + ++    +GV+ VG   TY PF   D+ G++
Sbjct: 1   MSKFAKPLLNASLALLLGAGLLSQAFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKL 60

Query: 57  VGFEIDLLNVMSQALGVELEMVSMPYTELVAGLQAKSFDLIGSGMTVTQERNLKLNFSDS 116
            GFE++L  ++++ LGV+ ++    +  ++A L++K  D++ + +T+++ER  K +FS+ 
Sbjct: 61  TGFEVELSELLAKELGVKAKIQPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEP 120

Query: 117 FIVVGQSVLLHPRLAGKVASVEDLDDASYQIATTEGTTGEAAARRFLGAARISSFSTPEE 176
           + V G   L+  + A ++      D A  ++    GT  E   ++ +  A + ++     
Sbjct: 121 YTVSGIQALILKKKAEQLNIKGAQDLAGKKVGVGLGTNYEQWVKKDVPQADVRTYEDDPS 180

Query: 177 GVRQVVQGKADAFIHDAPYNLIALSRPENA--TLLALEQPFTFEPLAFGV--KKGDVDSL 232
               +  G+ DA + D    L AL   + A  T LA +    F  L  GV  +KG+ + L
Sbjct: 181 KFADLRNGRIDAILID---RLAALEYAQKAKDTELAGD---AFSRLESGVALRKGEPELL 234

Query: 233 NWINHFLNQIAQDGTYDRLHDKWF 256
             IN  ++++  DGT  +L +K+F
Sbjct: 235 AAINKAIDKLKADGTLAKLSEKYF 258