Pairwise Alignments

Query, 703 a.a., general secretion pathway protein GspD from Pseudomonas simiae WCS417

Subject, 412 a.a., type 4 pili biogenesis protein from Pseudomonas putida KT2440

 Score =  102 bits (254), Expect = 4e-26
 Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 20/282 (7%)

Query: 406 ITAQKSSNQLLVRTRPAQWKEIEAAIKRLDNPPLQVQIETRILEVKLTGELDLGVQWYLG 465
           ++  + +N L+V     +  E+   + +LD P  QV IE RI+E  +  E  LGV+W  G
Sbjct: 146 LSVDERTNTLVVHLPADRLAEMRQLVAQLDVPVRQVAIEARIVEANVDYEKSLGVRWG-G 204

Query: 466 RLAGNS--SSTTVANASGSQGALGGGGAGLGATDSLFYSFVSSNLQVALHALETNGRTQV 523
            L G        +    G + A    G GL   D L        L + L A+E +G  ++
Sbjct: 205 PLYGEKLRPGKELFVDLGLERAGSSIGLGLLRGDVL--------LDLELSAMEKSGNGEI 256

Query: 524 LSAPSLVVMNNQPAQIQVGDNIPINQTTVNTGDADTTLSSVEYVQTGVILDVVPRINPGG 583
           +S P +V  + + A+I  G  +P  +T+       +  +SV + +  + L+V P+I P  
Sbjct: 257 ISQPKVVTADKETARILKGTEVPYQETS------QSGATSVSFREASLSLEVTPQITPDN 310

Query: 584 LVYMDIQQQVSDAENQSTNSDTPVNPRISTRSVSTQVAVQSGQTVLLGGLIKQDNQESVS 643
            V M ++  V+  E    N+   V P I    V+ +V V  G+T+++GG+        V 
Sbjct: 311 KVIMTVR--VTKDEPDYVNALNNVPP-IRKNEVNAKVRVADGETIVIGGVYSTSQNNVVD 367

Query: 644 AVPYLGKIPGLRWLFGSTSKSKDRTELIVLITPKVITSSGQA 685
            VP+ G +P +  LF   +  + ++EL+V +TP++++    A
Sbjct: 368 KVPFFGDLPYVGRLFRRDALQEKKSELLVFLTPRIMSDQAIA 409