Pairwise Alignments

Query, 703 a.a., general secretion pathway protein GspD from Pseudomonas simiae WCS417

Subject, 621 a.a., putative Secretion protein from Pseudomonas putida KT2440

 Score =  104 bits (260), Expect = 1e-26
 Identities = 73/274 (26%), Positives = 130/274 (47%), Gaps = 27/274 (9%)

Query: 413 NQLLVRTRPAQWKEIEAAIKRLDNPPLQVQIETRILEVKLTGELDLGVQWYLGRLAGNSS 472
           N L +R      +  E  ++  D    +V +E  ++EV  +  LDLG+QW          
Sbjct: 307 NTLTMRDTSDAVRMAEKLLQSQDQSNPEVVLEVEVMEVATSRILDLGLQW---------- 356

Query: 473 STTVANASGSQGALGGGGAGLGATDSLFYSFVSSNLQVA------LHALETNGRTQVLSA 526
                    + G L   G  +   D L     SS + +A      ++A + +  T  L++
Sbjct: 357 -------PNTFGVLSDDGNPVSVLDQL-KGINSSRISIAPAPQAKINAQDKDINT--LAS 406

Query: 527 PSLVVMNNQPAQIQVGDNIPI-NQTTVNTGDADTTLSSVEYVQTGVILDVVPRINPGGLV 585
           P + V N + A+I +G  +PI + T+V +        SV Y+  G+ L+V P ++    V
Sbjct: 407 PVIRVSNREQARIHIGQRVPIISATSVPSTQGPVITESVTYLDVGLKLEVQPTVHLNNEV 466

Query: 586 YMDIQQQVSDAENQSTNSDTPVNPRISTRSVSTQVAVQSGQTVLLGGLIKQDNQESVSAV 645
            + +  +VS+A          +  ++ TR+  T + +  G+T +L GL++ D+  S + +
Sbjct: 467 AIKVALEVSNATPLEATRQGTIPVQVDTRNAQTSLRLHDGETQVLAGLVRNDHNASGNKI 526

Query: 646 PYLGKIPGLRWLFGSTSKSKDRTELIVLITPKVI 679
           P LG IPGL  LFGS      ++EL++ ITP+++
Sbjct: 527 PGLGDIPGLGRLFGSNKDDMSKSELVLAITPRIV 560