Pairwise Alignments

Query, 703 a.a., general secretion pathway protein GspD from Pseudomonas simiae WCS417

Subject, 584 a.a., Type II secretion pathway protein XcpQ from Pseudomonas putida KT2440

 Score =  123 bits (308), Expect = 3e-32
 Identities = 115/462 (24%), Positives = 202/462 (43%), Gaps = 62/462 (13%)

Query: 254 VFGLQRASVAELMPQLQSMFGPDSGMPLAGMLRFLPIERTNSVVAISSQPQYLSEVGDWI 313
           VF ++ A+  +++  L+ +  P  G+         P    + +V ++     L  +   +
Sbjct: 135 VFSVRNAASEQVLGILKPLIDPRVGV-------ITPYPAAHQLV-VTDWRSNLERIASLL 186

Query: 314 RTIDE-----GGGNEPQMYVYDVRNMKAADLAKYLRQIYGTGAIKDDTPAKVAPGLRTTT 368
           R +D      G G+   +Y+   R+  A ++ K LR +   GA+  +             
Sbjct: 187 RQLDRPQEVPGSGSTQVIYL---RHANAGEVVKVLRGLSQEGAVPVE------------- 230

Query: 369 LSSLNSGGLQNNPPAAEESEPQEKEVAPTSALEAGTRITAQKSSNQLLVRTRPAQWKEIE 428
                          A E+E +++ V P +   +G R+  ++ +N +++    ++     
Sbjct: 231 --------------GAGEAEGKDRPVVPAAG-GSGIRLEYEEGTNAVVMVGPDSELAAYR 275

Query: 429 AAIKRLDNPPLQVQIETRILEVKLTGELDLGVQWYL------------GRLAGNSSSTTV 476
           A +++LD    QV +E  I EV  +   +LGVQW              G    N +S   
Sbjct: 276 AIVEQLDIRRAQVVVEAIIAEVSDSSAQELGVQWLFADEKFGAGIVNFGSNGVNIASIAG 335

Query: 477 ANASGSQGALGGG-GAGLGATDSLFYSFVSSNLQVALHALETNGRTQVLSAPSLVVMNNQ 535
           A ASG   ALG       GAT  + +     N  + ++AL+      +LS P+L+ ++N 
Sbjct: 336 AAASGDNEALGDLLSTTTGATAGIGHFGGGFNFAMLVNALKGKSGFNLLSTPTLLTLDNA 395

Query: 536 PAQIQVGDNIPINQTTVNTGDADTTLSSVEYVQTGVILDVVPRINPGGLVYMDIQQQVSD 595
            A I VG  +P    +V   +A+    ++E  + GV L + P+IN    V +DI Q+VS 
Sbjct: 396 EASILVGQEVPFVTGSVTQNNANP-YQTIERKEVGVKLRIKPQINIDNSVRLDIVQEVSS 454

Query: 596 AENQSTNSDTPVNPRISTRSVSTQVAVQSGQTVLLGGLIKQDNQESVSAVPYLGKIPGLR 655
             + S+ SD   N R     + T+V V+    V+LGGLI  +   S   VP LG IP L 
Sbjct: 455 IADTSSASDVITNKR----EIKTKVMVEDNGLVILGGLISDELSTSDQRVPLLGDIPYLG 510

Query: 656 WLFGSTSKSKDRTELIVLITPKVITSSGQARQVTDDYRQQMQ 697
            LF S +    +  L+V I P+++        +++D  + +Q
Sbjct: 511 RLFRSDATRNTKQNLMVFIRPRILRDGPSLAGLSEDKYRTLQ 552