Pairwise Alignments

Query, 294 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 308 a.a., HTH-type transcriptional regulator DmlR from Pseudomonas sp. DMC3

 Score =  239 bits (609), Expect = 7e-68
 Identities = 131/301 (43%), Positives = 181/301 (60%), Gaps = 7/301 (2%)

Query: 1   MERYRDMQLFAALAGQPSLASAARDAKVSGPTLVRAIARLEARLRVPLLARSTRGVSLTD 60
           M+R+++MQ+F  +A +   ++A+R   +S  ++ RA+A LE  +   LL R+TR V LT+
Sbjct: 1   MDRFQEMQIFVVVAQEQGFSAASRRLGLSAASVTRAVAALEQHIGTQLLVRTTRTVHLTE 60

Query: 61  AGSAYLADCVRLLAAVDAAEASAKGLHVQAQGNLRVFLPFLFSRYVMAPVLADYLDRYPE 120
           AG  Y  DC R+LA V  AE SA G H   +G L +  P LF    + PV+ADYL RYP+
Sbjct: 61  AGQRYCDDCRRILAEVQEAEDSAAGSHALPRGQLTITAPVLFGDLFVTPVMADYLCRYPD 120

Query: 121 VNLVVSYHDYYPNLHEEGLDVAILVGELPDSSLIARPLGHVRPILCASPDYLAVHGEPQR 180
           V++     D   N+ EEG+DVA+ +GELPDS+  A  +G VR ++CASP +LA HG P+ 
Sbjct: 121 VSINALLLDRVVNMVEEGIDVAVRIGELPDSNQHAIRVGEVRRVICASPGFLAAHGRPEH 180

Query: 181 PDDLKQHRLIAST---DQVHWDF----PGYQLKARARLGCATVQGAINAAVHGAGLIRCL 233
           P  L    ++A++    Q +W F        ++   RL     Q AI AA  G GL R L
Sbjct: 181 PQALAGLPVVATSAIGQQRNWPFLDGGEALSVRTEPRLTVTANQSAITAARKGLGLTRVL 240

Query: 234 SYPVHDHLQTGQLRRVLPDFEPPPLPVQVVYREGRNAPMRVRSFVDHCVTALRDYPAFQL 293
           SY V D +  G+L  VL +FE PPLP+ VVY+ GR AP R+RSFVD  V ALR++PA   
Sbjct: 241 SYQVADKVAAGELEIVLAEFELPPLPIHVVYQGGRKAPARIRSFVDFAVKALREHPALSA 300

Query: 294 A 294
           A
Sbjct: 301 A 301