Pairwise Alignments

Query, 313 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 327 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 96.7 bits (239), Expect = 7e-25
 Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 10/273 (3%)

Query: 44  PRGLALLRTNAGLIKRPAHHADHDNDQDCFLISQRSGYSQIVQNGQALQLAPGEMLLMDS 103
           P G+ ++   +  + RP    +   DQ   L+ Q  G+  I Q  +   L PG+  L D 
Sbjct: 52  PLGMFMIEAPSHRVARPDTRNEIALDQHYKLVLQLEGHGHISQRDREFHLHPGDWSLYDP 111

Query: 104 VGSIEITPFGLIEHASLSLSRPQVCKHLGGD-----ARAFGKISSTKACGRMLHVLMDQL 158
                IT        ++++ R Q       D     A            G  L  L DQL
Sbjct: 112 RVPYAITNPERSRLLAITIPRQQFKGMKIPDLHTCEAHTPAMQGLYAVLGSFLTSLADQL 171

Query: 159 CKDDTEDGAGEVEALQSAFVSLLGSALEQGDECREGLALLQGNNLRSYVQKVIDESLSQP 218
                  G     ++    + LL S L    + + G   + G  L++ V++ +   L+ P
Sbjct: 172 PSLPNAVG----RSVSDTVLGLLASTLATHSDEQFGAHPVPGV-LKARVKQFVHAHLADP 226

Query: 219 GLSPIGLANRLNISVRHLYRLFEEQDDSVCRYIQRARLKRSADDLTNPFLRSESITSIAY 278
            LS   +A +L  S R+L+R+FE++D ++ R+I + RL+R ++ L N   R  S++ IA+
Sbjct: 227 ALSLDLIAQQLRCSKRYLHRVFEDEDQTLDRFIWQMRLERCSEALRNAVGRRASVSEIAF 286

Query: 279 KWGFTDSAHFSRSFKKQFEVSPKDFRSSRMQAV 311
            WGF  SAHF R FK Q+ VSP++F+    Q++
Sbjct: 287 AWGFNSSAHFCRVFKAQYGVSPREFQRREAQSL 319