Pairwise Alignments

Query, 313 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 47.4 bits (111), Expect = 4e-10
 Identities = 56/201 (27%), Positives = 84/201 (41%), Gaps = 30/201 (14%)

Query: 109 ITPFGLIEHASLSLSRPQVCKHLGGDARAFGKISSTKACGRMLHVLMDQLCKDDTEDGAG 168
           +   GL   A +    PQ       DA         ++  R+LH L D L  D    G  
Sbjct: 115 VQSMGLAPDAEVQAQTPQSMTSAALDA------PMRESVERLLHCLQDPL--DAKVLGPA 166

Query: 169 EVE-----ALQSAFVSLLGSALEQ-GDECREGLALLQGNNLRSYVQKVIDESLSQPGLSP 222
            V      AL+     +L + +EQ G   R G AL             + E  ++P LS 
Sbjct: 167 RVREVLYTALRGPQAGVLRALVEQQGHFARIGAALAH-----------LREHYAEP-LSV 214

Query: 223 IGLANRLNISVRHLYRLFEEQDDSV-CRYIQRARLKRSADDLTNPFLRSESITSIAYKWG 281
             LA R N+SV   +  F+   D    +Y++R RL ++   L    L    +   A++ G
Sbjct: 215 EALAARANMSVSTFHEHFKRCTDMAPMQYLKRLRLLKAQQMLIGEGL---GVAQAAHRVG 271

Query: 282 FTDSAHFSRSFKKQFEVSPKD 302
           +  ++ FSR +K+QFE SP D
Sbjct: 272 YQSTSQFSREYKRQFERSPGD 292