Pairwise Alignments

Query, 237 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

 Score = 78.6 bits (192), Expect = 1e-19
 Identities = 65/228 (28%), Positives = 100/228 (43%), Gaps = 21/228 (9%)

Query: 1   MAGLLVDSLDVRYGTHIVFHKASLTVEAGSISGLLGPNGSGKTTFFDVLCGLKKMDGGAI 60
           MA L    L   Y    V    SL++++G I GLLGPNG+GKTT F ++ GL + + G +
Sbjct: 1   MATLKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRV 60

Query: 61  -------------NNAFSKLLYLSQIISTPPVFRMFDIFKMTMLFCSDTKVTQQHALDKI 107
                          A + + YL Q  S   +FR   +    M      K   +   D  
Sbjct: 61  LIDNLDVSHQPMHGRARAGIGYLPQEAS---IFRKLSVADNIMAILETRKDLDR---DGR 114

Query: 108 EKWSPGIAERY--GEIWNKKSALCSYGEKRWFFTLSLLCASPDLVILDEPTAGVDPEFRY 165
            K    + + +    I +      S GE+R       L  +P  ++LDEP AGVDP    
Sbjct: 115 RKELESLLQEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVG 174

Query: 166 HIWRCLEGAAAGGVAVLVSSHNVDEIVAHCDDFYMLSQRQFNRFTDAQ 213
            I + +    A G+ VL++ HNV E +  C+  Y+++  +     DA+
Sbjct: 175 DIKQIIHHLKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAE 222