Pairwise Alignments

Query, 820 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 819 a.a., putative ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  885 bits (2287), Expect = 0.0
 Identities = 466/820 (56%), Positives = 583/820 (71%), Gaps = 3/820 (0%)

Query: 1   MAVFHWTLRALLSHWRRHPVQFFSVLTGLWLATALLVGVQALNSQARDSYARASQLIGGE 60
           M +    L ALLSHWRRH VQ FS+ TGLWLATAL  GVQALNSQAR  YARAS ++ G 
Sbjct: 1   MKLLSLALLALLSHWRRHRVQCFSIFTGLWLATALWTGVQALNSQARSDYARASAVLTGP 60

Query: 61  PQASLGTPDGASFAQDVFAQLRRAGWPVSPVVQGRVQLEGQPDVRLQLMGIDPVSLPGSG 120
            QA L   +G  F Q ++ QLRR GW VSPV++GR++L G+P   ++L+GI+P+SLP + 
Sbjct: 61  LQAQLIARNGERFDQALYVQLRRLGWAVSPVLEGRLRLPGEPARSVRLIGIEPLSLPPAS 120

Query: 121 AVAGQRLSQAQMLAFFDPPGRTWIAPQTLQALGLHEGQQPTTLSGHTLPPLQIQADMAPG 180
           ++AG ++    + AF   PG+ W+ P TL+ L    G       G  LPP+ +Q  +APG
Sbjct: 121 SIAGVQVQAFDLQAFVGSPGQAWVGPDTLRQLNTSPGSPTRDSEGQLLPPMVLQPALAPG 180

Query: 181 LLLTDIGFAQPVLEMPGRLSRLLVDKAFAAGQPTAPAGLQLK-QGEDNNLARLTESFHLN 239
           +++ DIG AQ +L  PG+LSRLL+              L+L+ + +D  L RLT+SFHL+
Sbjct: 181 VIVVDIGHAQTLLNAPGQLSRLLLADTPGPLPADIARYLELQPRQDDGGLQRLTDSFHLD 240

Query: 240 LDALGFLSFVVGLFIVHAAIGLALEQRRGLLRTLRACGVSVRMLIASLSVELGALSLLGG 299
           L ALG L+FVVGLFI HAAIGLALEQRRGL+R LRACGVS++ L+ +L +ELG  + LGG
Sbjct: 241 LTALGLLAFVVGLFIAHAAIGLALEQRRGLIRNLRACGVSLKTLLCALVLELGLFAALGG 300

Query: 300 VLGVASGYLLASLLLPDVAASLRGLYGAEVPGQLNLSPWWWGAGLGLSLLGALLAGASSL 359
           + GVASGY LA+ LLPDVAASLRGLYGA+V G L+L   WW  G+ +S+LGALLAG  S+
Sbjct: 301 LAGVASGYALAAWLLPDVAASLRGLYGAQVAGTLSLPAGWWLLGVLVSVLGALLAGLESV 360

Query: 360 WRAARLPLLALANAQAWHEAHGRWLRRQGWVASAALLIAVLALWLGNSLAAGFVLMAALL 419
            RAARLPLLALA  QAW  A G WL+RQ  +A   LL+A+     G  L + F ++A LL
Sbjct: 361 MRAARLPLLALAQPQAWRLAQGPWLQRQALLAGLLLLLALGCGVFGAGLLSAFAMLAGLL 420

Query: 420 LGAALGLPVVLNGLLKAVLGRSRSVLGQWFLADCRQQLPALSLALMALLLALAANIGAGS 479
           L AAL LP +L+ +L  +  R    L QWF+AD RQQLPALSLAL+ALLLALAA++G GS
Sbjct: 421 LAAALLLPALLDQVLAWLARRCHRPLAQWFVADSRQQLPALSLALVALLLALAASVGVGS 480

Query: 480 MTSGFRYTFNNWLEQRLTAELYLNPQTPAQAQQLSTWLGQQPLVQTVLPTWQVAVQLQGW 539
           MT GFR TF  WL+ RL+A+LY+ P+  AQ  Q+  WL QQP    V+P W+  +QLQGW
Sbjct: 481 MTEGFRKTFVGWLDLRLSADLYVTPRDTAQGLQIVEWLKQQPGASVVMPGWRADMQLQGW 540

Query: 540 PADLFGVVDDPTYRQHWPLLEAANKPWDQLQQGDTLMLSEQLARRLNVRLGDSVNIATPQ 599
           P  + G+VD P YR  WPLLE  ++ W QL  G  +MLSEQLARRLN++LGDS+ +  P 
Sbjct: 541 PVQVQGIVDHPAYRTRWPLLEQHSRAWQQLASGQAVMLSEQLARRLNLQLGDSLKL--PA 598

Query: 600 GVWAPKVVGVYADYGNPKGHMLVNSTHLLTHWPTLSPARFNLRVAPENVAPLVREVQRAF 659
           G  A  VVG+YADYGNPKGH+LVN+  L  HWP  + A  ++ +  E VA L   +Q+ F
Sbjct: 599 GTPAMPVVGIYADYGNPKGHVLVNAGWLRAHWPQATLAGLSVDLNAEGVASLKAALQQHF 658

Query: 660 ALDDSRIIDQQQLKGWSSQVFERTFAATAALNSLTLGVAGVALFISLLTQSQSRLGQLAP 719
           ALDDSR+++Q +LK WS+ VF RTFAATAALNSLTLGVAGVALFI+LLT  Q+RLGQLAP
Sbjct: 659 ALDDSRVVEQARLKRWSTDVFNRTFAATAALNSLTLGVAGVALFINLLTLGQARLGQLAP 718

Query: 720 LWALGVTRRQLMLLNLGQTWLLAVLTLILALPLGLLLAWCLDAVINVQAFGWRLPLQVFP 779
           LWALGV R QL+ L+LGQT +L+  T++LA+PLGLLLAWCL AV+NVQAFGWRLPL VFP
Sbjct: 719 LWALGVRRMQLVWLSLGQTLMLSGFTVLLAIPLGLLLAWCLVAVVNVQAFGWRLPLYVFP 778

Query: 780 WQLAQLLGLAMLATLLASAWPLWQLYRSRPADLLRTFAHE 819
            QL QL  L ML +LLA AWPLWQL R  P +LLR  + E
Sbjct: 779 VQLLQLTVLGMLTSLLACAWPLWQLARRPPRELLRPLSDE 818