Pairwise Alignments

Query, 311 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 283 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  123 bits (309), Expect = 4e-33
 Identities = 88/294 (29%), Positives = 143/294 (48%), Gaps = 17/294 (5%)

Query: 1   MKRLLLTLTAAALLSAHAMAAEPASCKNIRMGVVS-WTDVVATSGMA-DVLLNGLGYDSK 58
           MK   L   AA L+ A +     A  K + +G V  W+D VAT+ +A +V+ + LGYD K
Sbjct: 1   MKMRRLLGAAATLVVAMSSTLASADSKTLSIGYVDGWSDSVATTHVAAEVIKSKLGYDVK 60

Query: 59  QTSAVQQIIFAGIRDKRLDIFLGYWKPAMDNNIAPFLAAKQVKVFDT-PSLADAQATLAV 117
             +    I++ G+   +LD  L  W P        + A  + KV D  P+  DA+  L V
Sbjct: 61  LQAVATGIMWQGVATGKLDAMLSAWLPVTHGE---YWAKNKDKVVDYGPNFKDAKIGLIV 117

Query: 118 PQYVADAGLKTFADIARFKDKLGGKIYGIEPGSGANTDIQKMIDTNRFGLGGFKLVASGE 177
           P+YV    ++       FK+K    I GI+ GSG      + I   ++GL  +KL AS  
Sbjct: 118 PEYVKAKSIEDLKTDTTFKNK----IVGIDAGSGVMLKTDEAI--KQYGLD-YKLQASSG 170

Query: 178 AGMLAAVQRAVNRKEFVVFVGWTPHPMNINMKMAYLTGSEDVFGPDEGRATVSTVTAPDF 237
           A M+A + RA +++E +   GW PH M    K+ +L   + ++G  E   TV+++ +   
Sbjct: 171 AAMIAELTRAEDKQESIAVTGWVPHWMFAKWKLRFLDDPKGIYGAAE---TVNSIGSKGL 227

Query: 238 AQRCPNANRVLENLTFTAAQE-SQLMVPIMERESPQDVARQWLRDHPEDLQRWL 290
            ++ P     L+   + +  E  ++M+ I E   P   A+ W+  HPE +  W+
Sbjct: 228 EKKAPEVAAFLKKFQWASKDEIGEVMLAIQEGAKPDAAAKDWVAKHPERVAEWV 281