Pairwise Alignments

Query, 311 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 307 a.a., putative choline betaine-binding protein from Pseudomonas putida KT2440

 Score =  232 bits (591), Expect = 1e-65
 Identities = 126/311 (40%), Positives = 183/311 (58%), Gaps = 6/311 (1%)

Query: 1   MKRLLLTLTAAALLSAHAMAAEP-ASCKNIRMGVVSWTDVVATSGMADVLLNGLGYDSKQ 59
           M +    + A AL +  A AA+  A C  ++M    W+D+ +T+ +A +LL  LGY  K 
Sbjct: 1   MHKFSAAVFALALSATTAHAADSDAQCSTVKMADPGWSDIASTNAVARLLLESLGYQVKI 60

Query: 60  TSAVQQIIFAGIRDKRLDIFLGYWKPAMDNNIAPFLAAKQVKVFDTPSLADAQATLAVPQ 119
            S    II+ G++D ++D FLG W PA       F+A   V+     +L   + TLAVP 
Sbjct: 61  DSLAVPIIYGGLKDGQVDAFLGNWMPAQQGFHDKFIANGDVQQLSR-NLEGTEFTLAVPD 119

Query: 120 YVADAGLKTFADIARFKDKLGGKIYGIEPGSGANTDIQKMIDTNRFGLGGFKLVASGEAG 179
           YV +AG+K FAD+ +   +   K+YGI  G+ AN  ++ +ID N F LG +KLV S E  
Sbjct: 120 YVWNAGVKDFADLQKHAGQFDKKLYGIGSGAPANLSLKAIIDKNEFNLGQWKLVESSEQA 179

Query: 180 MLAAVQRAVNRKEFVVFVGWTPHPMNINMKMAYLTGSEDVFGPDEGRATVSTVTAPDFAQ 239
           MLA V RAV +++F+ F+GWTPHPMN+ +KM YLTG E  FG    +  V T+T   + Q
Sbjct: 180 MLAQVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEKWFG---SKGEVYTLTRKGYPQ 236

Query: 240 RCPNANRVLENLTFTAAQESQLMVPIMERE-SPQDVARQWLRDHPEDLQRWLAGVTAFDG 298
            CPNA ++L NL FT   E+ +M  +++++ S  + A+ W++ HPE L  WLAGVT    
Sbjct: 237 ACPNAAKLLGNLKFTLDMENSIMAEVVDKKISFDEAAKAWVKAHPERLDGWLAGVTTKAD 296

Query: 299 TDGVAAVQASL 309
            D + AV+A L
Sbjct: 297 GDALEAVKAKL 307