Pairwise Alignments

Query, 502 a.a., ribonucleotide-diphosphate reductase subunit alpha from Pseudomonas simiae WCS417

Subject, 501 a.a., ribose ABC transporter ATP-binding protein RbsA from Escherichia coli ECRC62

 Score =  381 bits (978), Expect = e-110
 Identities = 209/496 (42%), Positives = 301/496 (60%), Gaps = 4/496 (0%)

Query: 1   MSSLLKLENICKRYPGVQALKSINLQVERGEIHALLGENGAGKSTLMKILGGVEHQDEGQ 60
           M +LL+L+ I K +PGV+AL    L V  G + AL+GENGAGKST+MK+L G+  +D G 
Sbjct: 1   MEALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYARDAGT 60

Query: 61  ILIDGQAQQFATYRDAIAAGIGIVFQEFSLIPYLTAVENIFLGHELSNRFGLLRKREMVE 120
           +L  G+   F   + +  AGIGI+ QE +LIP LT  ENIFLG E  NRFG +  + M  
Sbjct: 61  LLWLGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYA 120

Query: 121 ASEALFKRLGVTIDLQCAVKHLSVAEQQFVEIAKALALDARLLVLDEPTATLTPSEAELL 180
            ++ L  +L +       V  LS+ +QQ VEIAK L+ +++++++DEPT  LT +E E L
Sbjct: 121 EADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESL 180

Query: 181 FEIMRELKRQGVAVIFISHHLEEIFQVCDRISVLRDGGNVGVTDVADSDIDHLVEMMVGR 240
           F ++RELK QG  +++ISH ++EIF++CD ++V RDG  +   +VA    D L+EMMVGR
Sbjct: 181 FRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGR 240

Query: 241 RLACSFPPKPTRERGPLLLEVKDIQLVRNGPHN-RFQLHKGEILGFAGLVGSGRTELALG 299
           +L   +   P  ++ P  + +K   L   G ++  F L KGEILG +GL+G+GRTEL   
Sbjct: 241 KLEDQY---PHLDKAPGDIRLKVDNLCGPGVNDVSFTLRKGEILGVSGLMGAGRTELMKV 297

Query: 300 MMGALPSVSKDVWLRGEKITLDDPAQALAHGIGLLPESRKSEGLITDFSIRENISLNNLP 359
           + GALP  S  V L G ++    P   LA GI  + E RK +GL+   S++EN+SL  L 
Sbjct: 298 LYGALPRTSGYVTLDGHEVVTRSPQDGLASGIVYISEDRKRDGLVLGMSVKENMSLTALR 357

Query: 360 KYQNASGLIDKNRECASVEGLMKQLSIKAPSSESRVFNLSGGNQQKVVIARWINHHCDVL 419
            +  A G +    E  +V   ++  ++K PS E  +  LSGGNQQKV IAR +     VL
Sbjct: 358 YFSRAGGSLKHADEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVL 417

Query: 420 VFDEPTRGIDVGAKAQIYALMRSLTEQGYAIIMISSELPEIIGMCDRVAVFHKGAIVKLL 479
           + DEPTRG+DVGAK +IY L+      G +II++SSE+PE++GM DR+ V H+G +    
Sbjct: 418 ILDEPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEF 477

Query: 480 EASAVNPQEVMRHATG 495
                  + +M  A G
Sbjct: 478 TREQATQEVLMAAAVG 493



 Score = 84.7 bits (208), Expect = 7e-21
 Identities = 58/223 (26%), Positives = 106/223 (47%), Gaps = 6/223 (2%)

Query: 277 LHKGEILGFAGLVGSGRTELALGMMGALPSVSKDVWLRGEKITLDDPAQALAHGIGLLPE 336
           ++ G ++   G  G+G++ +   + G     +  +   G++ T   P  +   GIG++ +
Sbjct: 27  VYPGRVMALVGENGAGKSTMMKVLTGIYARDAGTLLWLGKETTFTGPKSSQEAGIGIIHQ 86

Query: 337 SRKSEGLITDFSIRENISLNNLPKYQNASGLIDKNRECASVEGLMKQLSIKAPSSESRVF 396
                 LI   +I ENI L    ++ N  G ID     A  + L+ +L+++   S+  V 
Sbjct: 87  ELN---LIPQLTIAENIFLGR--EFVNRFGKIDWKTMYAEADKLLAKLNLRF-KSDKLVG 140

Query: 397 NLSGGNQQKVVIARWINHHCDVLVFDEPTRGIDVGAKAQIYALMRSLTEQGYAIIMISSE 456
           +LS G+QQ V IA+ ++    V++ DEPT  +       ++ ++R L  QG  I+ IS  
Sbjct: 141 DLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHR 200

Query: 457 LPEIIGMCDRVAVFHKGAIVKLLEASAVNPQEVMRHATGGSSE 499
           + EI  +CD V VF  G  +   E +++    ++    G   E
Sbjct: 201 MKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGRKLE 243