Pairwise Alignments

Query, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 335 a.a., ABC transporter permease from Pseudomonas fluorescens SBW25

 Score =  248 bits (632), Expect = 2e-70
 Identities = 139/313 (44%), Positives = 194/313 (61%), Gaps = 2/313 (0%)

Query: 20  RLNLARLVRSPAFYPFVGLVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVI 79
           R  L +L+ S    P +GLV++ LV   +S+ F +  N  NI  QV++  I+A+GMT VI
Sbjct: 18  RPRLVKLLPSNIGGPLIGLVLLVLVFSFSSEFFFSLRNGLNILDQVTVLGILAIGMTAVI 77

Query: 80  LTGGIDLSVGPVMALSGTLTAGLMV-AGLPPGLAIGAGMLIGVAFGIGNGLFVAYLHMPP 138
           + GGIDLSVG V+A S  +   L     +P G AI   +  G+  G+ +G  + Y  +PP
Sbjct: 78  VIGGIDLSVGSVLAFSMMMLGWLYQDQAVPLGFAIPISIASGMLAGLVSGGLITYAKLPP 137

Query: 139 IIVTLATMGIARGLGLMYTDGYPISGLPDWFAFFGRESLFG-IQVPILIMLLTYLVAYVL 197
            I TL  M +ARGL  + T+G  I G PDWF        FG +   + + L+  +VA+V 
Sbjct: 138 FIATLTMMSVARGLANILTEGRQIVGYPDWFTSLATVRHFGFLSATVGLFLVMLVVAWVF 197

Query: 198 LQHTRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNA 257
           L+    GR +YA+GG+ E  RLSG++     L VY ISG  A IA + L +RL S QP+A
Sbjct: 198 LRFRAGGRNLYAMGGSPEVARLSGIKVRAITLWVYAISGALAGIAAVTLAARLDSSQPSA 257

Query: 258 GVSFELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGI 317
           G+S ELDAIAAVV+GGAS++GG G I GTL+G +++GVL NGLN+LGVSP++Q V+ G +
Sbjct: 258 GLSLELDAIAAVVIGGASLSGGVGSIGGTLVGVLIIGVLRNGLNLLGVSPFIQQVVIGVV 317

Query: 318 ILLAIFISRQRHK 330
           I LA+ I   R +
Sbjct: 318 IALAVTIDTLRRR 330