Pairwise Alignments

Query, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 331 a.a., Predicted ABC-type sugar transport system, permease component from Enterobacter asburiae PDN3

 Score =  234 bits (597), Expect = 2e-66
 Identities = 130/316 (41%), Positives = 189/316 (59%), Gaps = 8/316 (2%)

Query: 16  SSRLRLNLARLVRSPAFYPFVGLVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGM 75
           +S  +L ++ L+++    P + L+V     I  +  F T SNL NI RQ SIN ++A GM
Sbjct: 14  ASAKKLLMSDLMQTVGILPILILIVAVFGFI--APNFFTESNLLNITRQASINIVLAAGM 71

Query: 76  TCVILTGGIDLSVGPVMALSGTLTAGLMVAGLPPG---LAIGAGMLIGVAFGIGNGLFVA 132
           T +ILTGGIDLSVG ++   GT     MV  L P    L+I A +++G+  G+ NG  VA
Sbjct: 72  TFIILTGGIDLSVGSIL---GTTAVAAMVVSLIPEFAMLSIPAALMLGMVLGLFNGALVA 128

Query: 133 YLHMPPIIVTLATMGIARGLGLMYTDGYPISGLPDWFAFFGRESLFGIQVPILIMLLTYL 192
           +  +PP IVTL T    RG   +  DG  +      F + G   L  I   ++I L    
Sbjct: 129 FAGLPPFIVTLGTYTALRGAAYLLADGTTVINSNISFEWIGNNYLGPIPWLVVIALAVIA 188

Query: 193 VAYVLLQHTRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMS 252
           + + +L+ T +G +IYA+GGN +A RL+G++     L VYG+SGL + + G++  SRL S
Sbjct: 189 ICWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLYS 248

Query: 253 GQPNAGVSFELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSV 312
              N G  +ELDAIAAV+LGG S  GG G I GTL+GA+++  LNNG+ ++GVS + Q V
Sbjct: 249 ANGNLGTGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQLV 308

Query: 313 IKGGIILLAIFISRQR 328
           IKG +I++A+ I + R
Sbjct: 309 IKGAVIIIAVLIDKYR 324