Pairwise Alignments

Query, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 321 a.a., Ribose import permease protein RbsC from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  273 bits (698), Expect = 4e-78
 Identities = 139/297 (46%), Positives = 201/297 (67%), Gaps = 4/297 (1%)

Query: 36  VGLVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMALS 95
           + L+V+  ++   S  F T +NL NI +Q S+NAI+AVGMT VILT GIDLSVG ++AL+
Sbjct: 24  IALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALT 83

Query: 96  GTLTAGLMVAGLPPGLAIGAGMLIGVAFGIGNGLFVAYLHMPPIIVTLATMGIARGLGLM 155
           G + A ++   +   +A+ A + +G A G   G+ VA   +   I TL  M + RG+ ++
Sbjct: 84  GAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMV 143

Query: 156 YTDGYPISG----LPDWFAFFGRESLFGIQVPILIMLLTYLVAYVLLQHTRIGRYIYAIG 211
           YT+G P++       D F +FG     G+  P+ IM + +L A+ +L HTR+GRYIYA+G
Sbjct: 144 YTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAAWYMLHHTRLGRYIYALG 203

Query: 212 GNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAGVSFELDAIAAVVL 271
           GNE A RLSG+   + K++VY + GL A++AG++  +RL S QP AG  +ELDAIAAVVL
Sbjct: 204 GNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSSAQPTAGTGYELDAIAAVVL 263

Query: 272 GGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGIILLAIFISRQR 328
           GG S+AGG+G IVGTL+GA++LG LNNGLN+LGVS Y Q ++K  +ILLA+ +  ++
Sbjct: 264 GGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKK 320