Pairwise Alignments

Query, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 355 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  229 bits (585), Expect = 6e-65
 Identities = 131/310 (42%), Positives = 188/310 (60%), Gaps = 19/310 (6%)

Query: 35  FVGLVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMAL 94
           F+ L++V     L    FLTASNL  + + V+I  ++A+GMT VILTGGIDLSVG V  +
Sbjct: 17  FIALLLVVAFFSLMVPNFLTASNLLIMTQHVAITGLLAIGMTLVILTGGIDLSVGAVAGI 76

Query: 95  SGTLTAGLMVAGLP-----------PGLAIGAGMLIGVAFGIGNGLFVAYLHMPPIIVTL 143
            G +   L+  G+P           P + +   +L G+  G+ NG+ +  L + P I TL
Sbjct: 77  CGMVAGALLTNGIPLWGGNTLFLNVPEVILVVSVL-GMLIGLVNGVVITRLVVAPFICTL 135

Query: 144 ATMGIARGLGLMYTDGYP---ISGLP----DWFAFFGRESLFGIQVPILIMLLTYLVAYV 196
             M +ARG+ L++ DG     ++G+P      FAF G  +L GI +PI +ML   L+   
Sbjct: 136 GMMYVARGVALLFNDGGTYANLNGMPALGNTGFAFLGSGTLLGIYLPIWLMLAFLLLGLY 195

Query: 197 LLQHTRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPN 256
           L + T +GRYIYAIGGNE A RL+GV     K+ VY  SGL AA+ GLV+ S+L +  P 
Sbjct: 196 LTRKTPLGRYIYAIGGNESAARLAGVPIVNVKIFVYAFSGLCAALVGLVVASQLQTAHPM 255

Query: 257 AGVSFELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGG 316
            G  FE+DAI A VLGG ++AGGRG + G+++GA ++  L +G+ M+GVS + Q VIKG 
Sbjct: 256 TGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMVIKGL 315

Query: 317 IILLAIFISR 326
           +I+ A+ I +
Sbjct: 316 VIVTAVVIDQ 325