Pairwise Alignments

Query, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 325 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

 Score =  388 bits (997), Expect = e-113
 Identities = 200/328 (60%), Positives = 253/328 (77%), Gaps = 6/328 (1%)

Query: 1   MQQGAQVNTSISTGDSSRLRLNLARLVRSPAFYPFVGLVVVTLVMILASDTFLTASNLSN 60
           M   A    +  TG  S      + ++RSP   P  GL+VV+++M LASD F + +N+ N
Sbjct: 1   MSLDANTGVAAKTGGFS-----FSAMLRSPLALPLAGLIVVSILMGLASDNFFSVNNIMN 55

Query: 61  IARQVSINAIIAVGMTCVILTGGIDLSVGPVMALSGTLTAGLMV-AGLPPGLAIGAGMLI 119
           + RQVS+  I+AVGMT VILTGGIDLSVG VMAL GTL+AGLMV  GL P +A+ AG+ I
Sbjct: 56  VLRQVSVVGILAVGMTFVILTGGIDLSVGAVMALVGTLSAGLMVNTGLSPAIALPAGLFI 115

Query: 120 GVAFGIGNGLFVAYLHMPPIIVTLATMGIARGLGLMYTDGYPISGLPDWFAFFGRESLFG 179
           G+  GI NG  VA+  MP IIVTLATMG+ARGLGL+Y+ GYP+SG+P W ++FG   +  
Sbjct: 116 GLGIGIFNGALVAWGRMPAIIVTLATMGMARGLGLIYSGGYPVSGIPSWISWFGVGRVGI 175

Query: 180 IQVPILIMLLTYLVAYVLLQHTRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTA 239
           + VP++IM++ Y VA+VLLQ T  GR++YA+GGNE A RLSGV+  R KL VYGISG+TA
Sbjct: 176 VPVPVIIMVVIYAVAWVLLQRTAFGRHVYALGGNELAARLSGVKTRRVKLAVYGISGVTA 235

Query: 240 AIAGLVLTSRLMSGQPNAGVSFELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNG 299
           A A L+LT RLMSGQPNAGV FELDAIAAVVLGG +IAGGRG+I+GTL+GA+LLG+LNNG
Sbjct: 236 AFAALILTGRLMSGQPNAGVGFELDAIAAVVLGGTAIAGGRGLILGTLIGAVLLGILNNG 295

Query: 300 LNMLGVSPYVQSVIKGGIILLAIFISRQ 327
           LN++G++PY+Q VIKGGIILLAI+I R+
Sbjct: 296 LNLMGINPYLQDVIKGGIILLAIYIGRE 323