Pairwise Alignments

Query, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 334 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  236 bits (601), Expect = 8e-67
 Identities = 128/281 (45%), Positives = 181/281 (64%), Gaps = 3/281 (1%)

Query: 47  LASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMALSGTLTAGLMVAG 106
           + +DTFLTA NL N+ RQ +   I++V MT VI+TGGIDLSVG ++AL   + A L+ AG
Sbjct: 39  VTTDTFLTAGNLLNVVRQAAPILIVSVAMTFVIITGGIDLSVGSMVALINAVGAILLAAG 98

Query: 107 LPPGLAIGAGMLIGVAFGIGNGLFVAYLHMPPIIVTLATMGIARGLGLMYTDGY--PISG 164
            P  L + A +++G   G+  G F+AY  +P  IVTLA + I RG+ L  T GY  PI  
Sbjct: 99  YPWPLVVVAMLVLGGGLGLVQGWFIAYQGIPAFIVTLAGLSILRGVALYITQGYSVPIPD 158

Query: 165 LPDWFAFFGRESLFGIQVPILIMLLTYLVAYVLLQHTRIGRYIYAIGGNEEAVRLSGVRA 224
            P +F + GR    G+ VP LI ++  ++AY++L  TR GR + A+G N EA R  G+ A
Sbjct: 159 APGFF-YLGRGDFLGMPVPALIGVVVTVIAYIVLSSTRYGRRVVAVGSNPEAARRVGMPA 217

Query: 225 ARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAGVSFELDAIAAVVLGGASIAGGRGVIV 284
                 VY  +G+ +AIAGL++ +RL SG  NA V FEL  +AAVVLGG S+ GGRG I+
Sbjct: 218 KWILASVYLAAGVASAIAGLMIAARLGSGSSNAAVGFELQVVAAVVLGGTSLMGGRGTIL 277

Query: 285 GTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGIILLAIFIS 325
           GT+LG M + V+ NGL ++ +SP+   ++ G IIL AI+++
Sbjct: 278 GTVLGTMTIAVIGNGLILMHISPFFTQIVTGAIILAAIWLN 318