Pairwise Alignments

Query, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 340 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  233 bits (594), Expect = 5e-66
 Identities = 130/310 (41%), Positives = 184/310 (59%), Gaps = 17/310 (5%)

Query: 38  LVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMALSGT 97
           L  +  V    S+ F T +N   IA QV+  A++ +G TCVI+TGGIDLSVG V+AL+G 
Sbjct: 30  LFALVAVFSATSNAFFTVNNGMTIALQVTSIALLGIGATCVIITGGIDLSVGSVLALAGV 89

Query: 98  LTA-GLMVAGLPPGLAIGAGMLIGVAFGIGNGLFVAYLHMPPIIVTLATMGIARGLGLMY 156
           + A  +   G+P  + +  G+L G   G+ NGL V    +PP I TL  M IARG+ L  
Sbjct: 90  VAALAVKELGMPVPIGMLLGILTGSLCGLINGLLVTRFKLPPFIATLGMMLIARGVALQI 149

Query: 157 TDGYPISGLPDWFAFFGRESLF----------------GIQVPILIMLLTYLVAYVLLQH 200
           T    +SGL + F   G  +LF                GI  P+++M++  L    +L  
Sbjct: 150 TGARAVSGLGESFGELGNGALFRIVTIGDDGFPNVVFPGIPYPVILMVVIALAVSFMLNR 209

Query: 201 TRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAGVS 260
           + +GR+IYA+G N +A RLSGV  AR     Y +SG  A + G VL SRL++ QPN GV 
Sbjct: 210 SILGRHIYAVGSNADAARLSGVNVARVTNFTYILSGTLAGLTGCVLMSRLVTAQPNEGVM 269

Query: 261 FELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGIILL 320
           +ELDAIA+ V+GG S+ GG G I GT +GA ++G+L NGLNM GVS + Q +I G +IL+
Sbjct: 270 YELDAIASAVIGGTSLIGGVGTISGTAIGAFVIGILRNGLNMNGVSAFTQQIIIGLVILV 329

Query: 321 AIFISRQRHK 330
            ++I + R++
Sbjct: 330 TVWIDQLRNR 339