Pairwise Alignments

Query, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 326 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  248 bits (634), Expect = 1e-70
 Identities = 135/296 (45%), Positives = 190/296 (64%), Gaps = 2/296 (0%)

Query: 29  SPAFYPFVGLVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSV 88
           S A  P +GL+++ + +  AS+ FL+  N  NI  Q+++  I+AVGMT VIL GGIDLSV
Sbjct: 21  SGATGPLLGLLMLCVFLTFASENFLSLRNGLNILDQITVLGIMAVGMTFVILLGGIDLSV 80

Query: 89  GPVMALSGTLTAGLM-VAGLPPGLAIGAGMLIGVAFGIGNGLFVAYLHMPPIIVTLATMG 147
           G V+ALS  +      VAG+P G+AI   ++   A G+  G+ V    +P  I TLA M 
Sbjct: 81  GSVLALSMMIMGWTANVAGMPMGMAIVLALVASAACGLVVGILVTAFRVPAFIATLAMMS 140

Query: 148 IARGLGLMYTDGYPISGLPDWFAFFGRESLFGI-QVPILIMLLTYLVAYVLLQHTRIGRY 206
           +ARGL  M TDG  I G PDWF     E  FG+    +L+ML+  LV++  L+    GR 
Sbjct: 141 VARGLANMITDGQQIVGFPDWFMMLAIERHFGVLTATVLLMLVVVLVSWAFLRFRSEGRT 200

Query: 207 IYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAGVSFELDAI 266
           +YA+GGN E  RL+G+      + VY +  + A +AG+VL +RL S QP++G  +ELD I
Sbjct: 201 VYAVGGNPEVARLAGINVPLVTICVYVVCAVLAGLAGIVLAARLDSVQPSSGFGYELDTI 260

Query: 267 AAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGIILLAI 322
           AAVV+GG S++GG G I GTL+G +++GVL NGLN+L VSP++Q VI G +I+LA+
Sbjct: 261 AAVVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVSPFLQQVIIGVVIVLAV 316