Pairwise Alignments

Query, 334 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

 Score =  117 bits (294), Expect = 3e-31
 Identities = 89/333 (26%), Positives = 157/333 (47%), Gaps = 15/333 (4%)

Query: 8   TISDIAKRVGMTTITVSRALSKPDLVKPATLARILEVAREMDYVPNAFARGLKRSESLII 67
           TI D+A +  ++  TVS  ++    V      R+    RE+ YVPNA AR LK + +  +
Sbjct: 3   TIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTSTL 62

Query: 68  GVITASVDNPFYSEMIKAISREAKQHGYTIMLVDTDELEELESKAVDTLLGYRVAG--II 125
           G++  +  NP+++E+++ +       GYT++L +TD+    +S  +  L   R+ G  ++
Sbjct: 63  GMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLIVV 122

Query: 126 LSPVSDEPSYQPDYLERLANGKTPVVLLDRTIHDSPFSRVVLDNYHSGIQAAHYLLRQTP 185
           L+   D+ +     +++L   + P VL+DR I D     V   +   G+ A  +LL  + 
Sbjct: 123 LTGTGDDDA----LVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLL--SL 176

Query: 186 NLKRLLVLTGPEHSRITVERLKGLREVLAE---HPQV---EVAVQAGDYTLMPSYLHTLD 239
             KR+  + G      + +R++G R  LAE    P +   +  +  G +T    Y     
Sbjct: 177 GHKRIACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHA 236

Query: 240 YLAEHSAPDAIMGFNQLITLGALRALRMHNI-AHDSLTICGIDRLPFADIFGVPIACVAH 298
            L     P A+   N L+ +GALRA     +   D L+I G D +  +     P+  VA 
Sbjct: 237 ILRTERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQ 296

Query: 299 DASLAGSSAVRLLLDRLEDPFKPRDKVVIAGQL 331
                G+ AV +LL+++    +   KVV+  +L
Sbjct: 297 PKERIGAMAVDMLLEQMGGKRRDARKVVLQPEL 329