Pairwise Alignments

Query, 249 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 255 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  190 bits (483), Expect = 2e-53
 Identities = 104/250 (41%), Positives = 150/250 (60%), Gaps = 5/250 (2%)

Query: 4   LLETKDLELAYGAFHAVNGVNLKVEAGTIHTIIGPNGAGKTSLFHCLTGERQATAGAIHF 63
           +LET+DL + +G   AVN V+     GT+  I+GPNGAGKT+ F+ ++G+ +A+AG +  
Sbjct: 1   MLETRDLTIRFGGHVAVNSVSCAFAPGTLTAIVGPNGAGKTTYFNLISGQLKASAGTVSL 60

Query: 64  DGKNLMRKPAHGRVGLGMARSFQLTSLFQNLSVRENLRLAAQG-RDGA--RALNFWRRVD 120
           DG+ L       R   G+ R+FQLT+LF NL+V EN+RLA Q  R+GA  R LN W    
Sbjct: 61  DGQPLSGLSPSARTHAGLGRAFQLTNLFPNLTVLENVRLAVQATREGAHRRGLNLWSIWS 120

Query: 121 SKREHLEMADQVLERLQLTARADTLAGELSHGQQRVLEVGMSICSKPKLLMLDEPTSGMG 180
             +   E ADQ+L  + L +R       L HG QR LEV + +  +PK+ M DEPT+GM 
Sbjct: 121 DHKALTERADQILAEVALKSREHATVASLPHGDQRKLEVALLMALEPKVFMFDEPTAGMN 180

Query: 181 IDDIPIMTQLISDLGRD--HTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEFVRADE 238
             + P++  LI  L +D   T+LL+EH M +V  ++ RI V+ +G ++ +G P  V A  
Sbjct: 181 AAEAPVILDLIRKLKQDKTKTILLVEHKMDVVRELADRIIVLHNGTLVADGEPAEVIASP 240

Query: 239 RVRTAYLGEA 248
            V+ AYLG A
Sbjct: 241 VVQEAYLGVA 250