Pairwise Alignments

Query, 249 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 254 a.a., Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  182 bits (462), Expect = 6e-51
 Identities = 102/247 (41%), Positives = 153/247 (61%), Gaps = 4/247 (1%)

Query: 5   LETKDLELAYGAFHAVNGVNLKVEAGTIHTIIGPNGAGKTSLFHCLTGERQATAGAIHFD 64
           L+ +D+ + +G   AVNG++ +VE G IH +IGPNGAGK++ F+C++     ++G++ F+
Sbjct: 7   LDVRDISVVFGGLKAVNGLSFEVEQGRIHALIGPNGAGKSTTFNCISRFYTPSSGSVTFE 66

Query: 65  GKNLMRKPAHGRVGLGMARSFQLTSLFQNLSVRENLRLAAQGRDGARALNFWRRVDSKRE 124
           G+ L     H    LG+AR+FQ   LF  LSV EN+ L    R  A      RR D  RE
Sbjct: 67  GRELTSVSPHRMASLGIARTFQNLELFAELSVLENVLLGTHSRGAATLGRLLRRPD--RE 124

Query: 125 HLEMADQVLERLQLTARADTLAGELSHGQQRVLEVGMSICSKPKLLMLDEPTSGMGIDDI 184
             + A  +LER+ L       A +L  G+Q++LE+  ++  +PKLL+LDEP +G+   +I
Sbjct: 125 TEDFAMHLLERVGLADERHQPARDLDFGRQKLLELARALAIRPKLLLLDEPAAGLRNREI 184

Query: 185 PIMTQLISDL-GRDH-TVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEFVRADERVRT 242
             + +L+ +L  RD  TVLL+EH M +VMSIS RITVM+ G+ + EGTP  + ++ RV  
Sbjct: 185 ESLDRLLKELVARDGITVLLVEHVMQLVMSISDRITVMAFGEKIAEGTPSEIGSNARVIE 244

Query: 243 AYLGEAA 249
           AYLG+ A
Sbjct: 245 AYLGKGA 251