Pairwise Alignments

Query, 249 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 255 a.a., branched chain amino acid transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  167 bits (423), Expect = 2e-46
 Identities = 103/254 (40%), Positives = 149/254 (58%), Gaps = 12/254 (4%)

Query: 4   LLETKDLELAYGAFHAVNGVNLKVEAGTIHTIIGPNGAGKTSLFHCLTGERQATAGAIHF 63
           +L+   L + +G   AVNGV L V+   +  +IGPNGAGKT++F+CLTG  + + G I  
Sbjct: 5   ILQVSGLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYKPSGGTILL 64

Query: 64  DGKNLMRKPAHGRVGLGMARSFQLTSLFQNLSVRENLRLAAQGRD-------GARALNFW 116
           DG+ +     H     G+ R+FQ   LF+ ++  ENL L AQ R        G      +
Sbjct: 65  DGQPIQGLAGHQIARKGVVRTFQNVRLFKEMTALENL-LIAQHRHLNTNFFAGLFKTPSF 123

Query: 117 RRVDSKREHLEMADQVLERLQLTARADTLAGELSHGQQRVLEVGMSICSKPKLLMLDEPT 176
           RR  S++E +E A   LE++ LT  A+  AG L++GQQR LE+   + ++P+++MLDEP 
Sbjct: 124 RR--SEKEAMERAQYWLEKVNLTEFANRTAGTLAYGQQRRLEIARCMMTQPRIIMLDEPA 181

Query: 177 SGMGIDDIPIMTQLISDLGRDH--TVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEFV 234
           +G+   +   +  LI+ L   H  TVLLIEH+M +VMSIS  I V++ G  L  GTPE +
Sbjct: 182 AGLNPKETEDLKALIAYLRESHNVTVLLIEHDMKLVMSISDHIVVINQGTPLAHGTPEQI 241

Query: 235 RADERVRTAYLGEA 248
           R +  V  AYLGEA
Sbjct: 242 RDNPDVIKAYLGEA 255