Pairwise Alignments

Query, 249 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 262 a.a., Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  166 bits (419), Expect = 6e-46
 Identities = 93/244 (38%), Positives = 146/244 (59%), Gaps = 5/244 (2%)

Query: 5   LETKDLELAYGAFHAVNGVNLKVEAGTIHTIIGPNGAGKTSLFHCLTGERQATAGAIHFD 64
           LE KDL  ++G    + GVNL V AG    IIGPNGAGK++LF+ ++G    ++G +  +
Sbjct: 11  LELKDLRKSFGKTEIIRGVNLAVNAGERVGIIGPNGAGKSTLFNLISGRFAPSSGQVLLN 70

Query: 65  GKNLMRKPAHGRVGLGMARSFQLTSLFQNLSVRENLRLAAQGRDGARA--LNFWRRVDSK 122
           G+ +  K        G++RSFQ+T++F  LSV ENLR       G +   L F   +D  
Sbjct: 71  GQRIDGKKPFEINRAGLSRSFQITNIFPKLSVFENLRCGVLWSLGYKYTFLKFLADLDDA 130

Query: 123 REHLEMADQVLERLQLTARADTLAGELSHGQQRVLEVGMSICSKPKLLMLDEPTSGMGID 182
            E    A+Q++E ++L  + DTLA  L++ +QR LE+G++I     +++LDEPT+GM   
Sbjct: 131 NER---AEQLMEMIKLDRKRDTLAMNLTYAEQRALEIGITIAGGANVILLDEPTAGMSKS 187

Query: 183 DIPIMTQLISDLGRDHTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEFVRADERVRT 242
           +      LI ++    T+L +EH+M +V  ++ RI V+ +G++L   TP  VRA++RV+ 
Sbjct: 188 ETSRFISLIKEVTVGKTLLTVEHDMGVVFGLADRIAVVVYGEVLAFDTPAAVRANQRVQE 247

Query: 243 AYLG 246
           AYLG
Sbjct: 248 AYLG 251