Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 355 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  137 bits (345), Expect = 4e-37
 Identities = 104/331 (31%), Positives = 156/331 (47%), Gaps = 43/331 (12%)

Query: 21  VLAVLIGLPLI--LP----------SATLATEILIFAMAALACNLLLGYTGLLSFGQGIF 68
           +L VL+ LPL+  LP          + TL  +IL +A+ ALA +L+ GY G+LS G G+F
Sbjct: 25  ILIVLLALPLLSLLPPDNAFHISAYTLTLVGKILCYAIVALALDLVWGYAGMLSLGHGLF 84

Query: 69  FGAGAYCAALLMIHLQLG------------------------LFTALLGAAIAGGFLALL 104
           F  G Y   + ++    G                           A+    +A G LAL+
Sbjct: 85  FALGGYAMGMYLMRQASGDELPAFMTFLSWTELPWYWVGTQHFVWAMCLVVLAPGLLALV 144

Query: 105 VGALAIRRT--GIYFVMLTLAFSQMAYFVAYTLSDWTGGDNGLLSVPRPEIRLGETVLLS 162
            G  A R    G+YF ++T A +     + +      GG+NG  +       LG  +   
Sbjct: 145 FGFFAFRSRIKGVYFSIMTQALTFAGMLLFFRNETGFGGNNGFTNF---RSILGFGITEP 201

Query: 163 LADARAFYAFVAVLFLLIFIGARRVIASPFGSTLMAIRENETRASAIGYDTRHFKILVFV 222
              A  F A VA+L   +FIG R +  S FG  L A+R+ E R    GYD R FK+ V+V
Sbjct: 202 GTRAVLFVATVALLVASLFIGWR-LARSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWV 260

Query: 223 LSGAVTGIAGALYAMLLHFVPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGSIVLLGD 282
           LS  + G+AGALY   +  +  S +    S    +   +GG G+L G LLGAG +  +  
Sbjct: 261 LSAVLCGLAGALYVPQVGIINPSEMSPTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKS 320

Query: 283 FLSDLWPR-WLMLLGVILILVVIFMRGGLWG 312
           + +  +P  WL  LG + I+V +++  G+ G
Sbjct: 321 WFTVAFPEYWLFFLGALFIIVTLYLPKGVIG 351