Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 327 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  145 bits (367), Expect = 1e-39
 Identities = 100/320 (31%), Positives = 156/320 (48%), Gaps = 19/320 (5%)

Query: 20  WVLAVLIGLPLILPSATLATE---------ILIFAMAALACNLLLGYTGLLSFGQGIFFG 70
           W  AVL+G+ ++L      T          +++F++ AL  +L++G TG  +     FFG
Sbjct: 11  WDRAVLLGMAVVLAVLPFTTSGYVLYVVNLLMVFSVLALGMHLVIGETGQFALSHAAFFG 70

Query: 71  AGAYCAALLMIHLQLGLFTALLGAAIAGGFLALLVGALAIRRTGIYFVMLTLAFSQMAYF 130
            G Y A L+    Q   F ++L  A+    L  ++G LA+R   IY  + T AF +   +
Sbjct: 71  IGIYTAGLINNQWQPPFFVSILAGALLSAALGWVIGLLALRMRDIYLALATFAFGEAMQW 130

Query: 131 VAYTLSDWTGGDNGLLSVPRPEIRLGETVLLSLADARAFYAFVAVLFLLIFIGARRVIAS 190
           V       T G NGL   P     LG   L++   A  F   +A L L + +   R   S
Sbjct: 131 VFLNWESVTNGSNGLQMKPAS---LGGYQLMNDLQAYPFVIAIAALMLWLTVTLSR---S 184

Query: 191 PFGSTLMAIRENETRASAIGYDTRHFKILVFVLSGAVTGIAGALYAMLLHFVPLSNIDLM 250
             GS+  A+RE++  A A+G +TR  K+  FVLS A  G+AG +Y +   F+   ++   
Sbjct: 185 RLGSSFRAVRESDVAAVAMGVNTRTVKVTAFVLSAAFAGVAGGMYTLFTSFIHPESLGFQ 244

Query: 251 MSENILIMTIVGGTGSLFGSLLGAGSIVLLGDFLSDLWPRWLMLLGVILILVVIFMRGGL 310
            +  IL M +VGG GS+ G++ GA    L  + L        ++ G IL+L ++F    L
Sbjct: 245 TTILILTMVVVGGLGSVRGAVAGAIVFGLASELLRQAPSYQEIIYGGILMLFMMF----L 300

Query: 311 WGGLVSLFERVRGSRKTAAV 330
             G+ SLF   R S++ A+V
Sbjct: 301 PKGMASLFAARRKSQRAASV 320