Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 329 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  167 bits (423), Expect = 3e-46
 Identities = 104/296 (35%), Positives = 155/296 (52%), Gaps = 11/296 (3%)

Query: 21  VLAVLIGLPLILPSATL------ATEILIFAMAALACNLLLGYTGLLSFGQGIFFGAGAY 74
           +L +L   PLI P   L         +LI A+AA + N +LG+ G+++ G   F G GAY
Sbjct: 14  LLVLLAAFPLIAPLFGLEFYIGFVRRVLIVALAAASLNFILGFGGMVALGHAGFIGMGAY 73

Query: 75  CAALLMIHLQLGLFTALLGAAIAGGFLALLVGALAIRRTGIYFVMLTLAFSQMAYFVAYT 134
               L     +  +     AA+  G +A L+G +A+R  G+YF+M TLAF+QM YFV  +
Sbjct: 74  TVVALSDAGVMSGWIMWPAAALVAGLVAALIGTVALRTRGVYFIMTTLAFAQMLYFVVVS 133

Query: 135 LSDWTGGDNGLLSVPRPEIRLGETVLLSLADARAFYAFVAVLFLLIFIGARRVIASPFGS 194
           L  + GGD+G   + RP +  G    L L +   FY  V  +  L      R   S FG 
Sbjct: 134 LRRY-GGDDGYTLMSRPTLLPG----LDLGNESNFYWVVLAIVALALWWLHRATRSRFGH 188

Query: 195 TLMAIRENETRASAIGYDTRHFKILVFVLSGAVTGIAGALYAMLLHFVPLSNIDLMMSEN 254
            LM IR+NETR  A+GY     +++ F ++GA+ G+AGAL A    FV  + +    S  
Sbjct: 189 ALMGIRDNETRMRALGYPVFRLQLVAFAIAGAIAGLAGALLAGGNGFVSPATMHWTQSAT 248

Query: 255 ILIMTIVGGTGSLFGSLLGAGSIVLLGDFLSDLWPRWLMLLGVILILVVIFMRGGL 310
           +L+M ++GG G  +G  +GA   ++L + L      W M LG++LI V ++   GL
Sbjct: 249 LLVMVVIGGLGRSWGGPVGAVVWLVLEEVLKQHTEHWHMPLGLLLIAVALWAPKGL 304