Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 330 a.a., Broad-specificity amino acid ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  202 bits (513), Expect = 1e-56
 Identities = 125/332 (37%), Positives = 183/332 (55%), Gaps = 21/332 (6%)

Query: 11  KTQSKAMLLWVLAVLIGLPLILPSATLATEILIFAMAALACNLLLGYTGLLSFGQGIFFG 70
           K  S  +   +L  L+  P          +++ FA+ A A NLLLG+TGLLSFG   F G
Sbjct: 4   KKISTVVYALLLLALVLAPFFGAYPVFVMKLMCFALFAAAFNLLLGFTGLLSFGHAAFLG 63

Query: 71  AGAYCAALLMIHLQLGLFTALLGAAIAGGFLALLVGALAIRRTGIYFVMLTLAFSQMAYF 130
             AY A   M    L     L+   + G FL  + G LAIRR GIYF M+TLA +QM +F
Sbjct: 64  GSAYVAGHAMKVWGLTPELGLIAGTLTGAFLGWVFGVLAIRRQGIYFAMITLALAQMMFF 123

Query: 131 VAYTLSDWTGGDNGLLSVPRPEIRLGETVLLSLADARAFYAFVAVLFLLIFIGARRVIAS 190
           VA   + +TGG++GL  VPR ++      L+ L+     Y    V+ +  F+   R I S
Sbjct: 124 VALQ-AKFTGGEDGLQGVPRGKL----FGLIDLSSDLTMYYVALVIVVAAFLLIVRTIHS 178

Query: 191 PFGSTLMAIRENETRASAIGYDTRHFKILVFVLSGAVTGIAGALYAMLLHFVPLSNIDLM 250
           PFG  L  I+ENE RA ++GYD   FK+L FV+S A++G+AG+L  ++L F  LS++   
Sbjct: 179 PFGQVLKGIKENEPRALSLGYDVSRFKLLAFVISAALSGLAGSLKTLVLGFATLSDVHWT 238

Query: 251 MSENILIMTIVGGTGSLFGSLLGAGSIVL-------LGDFLSDL----WPRWL-----ML 294
            S  +++MT+VGG G+L G L+G+  +VL       LG FL+ +    W   L     M+
Sbjct: 239 ASGQVILMTLVGGLGTLSGPLVGSAVVVLLENKIGELGSFLARITTIDWFNTLGESVTMV 298

Query: 295 LGVILILVVIFMRGGLWGGLVSLFERVRGSRK 326
            G+I ++ V+  R G+ G +++  ER +G  K
Sbjct: 299 TGLIFVICVLAFRKGIMGEIIAFIERRKGRVK 330