Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 600 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  135 bits (339), Expect = 3e-36
 Identities = 85/276 (30%), Positives = 137/276 (49%), Gaps = 6/276 (2%)

Query: 37  LATEILIFAMAALACNLLLGYTGLLSFGQGIFFGAGAYCAALLMIHLQLGLFTALLGAAI 96
           +AT+  +  + A+  NLL GY G +S G G     G+Y  ALLMI      + A L    
Sbjct: 46  MATQAGVMMLVAIGLNLLTGYAGQVSLGHGALVAVGSYTTALLMIDAHWSFWLAALAGMA 105

Query: 97  AGGFLALLVGALAIRRTGIYFVMLTLAFSQMAYFVAYTLSDWTGGDNGLLSVPRPEIRLG 156
                 L++   A+R +  YF ++TL F+Q+   +       T G +GL+ +P P I  G
Sbjct: 106 VSTLAGLVMALPALRLSTWYFALVTLTFAQVVTDLLVEWRSLTRGFSGLVGIPPPAI--G 163

Query: 157 ETVLLSLADARAFYAFVAVLFLLIFIGARRVIASPFGSTLMAIRENETRASAIGYDTRHF 216
             VL  +      Y  VA   +L F+G R +  S +G  ++A R+N   A+A G      
Sbjct: 164 AHVLGPVE----VYLAVAACVVLAFLGVRNLSRSRYGRGMVAARDNPLAATASGVSLLRI 219

Query: 217 KILVFVLSGAVTGIAGALYAMLLHFVPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGS 276
           K+  F +S A+ G+AGA YA+    +   +     S   L++ +VGG G L+G ++G   
Sbjct: 220 KLFAFAVSAALAGLAGAFYAVQKTVITPEDFTADFSIFFLLIIVVGGLGRLWGPVVGTLV 279

Query: 277 IVLLGDFLSDLWPRWLMLLGVILILVVIFMRGGLWG 312
             LL + L  L    L++ GV+L+++++F   G+ G
Sbjct: 280 FFLLPELLGPLQSWRLLIYGVVLLVLMVFAPHGIMG 315