Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 316 a.a., Benzoate ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  142 bits (357), Expect = 1e-38
 Identities = 106/284 (37%), Positives = 154/284 (54%), Gaps = 22/284 (7%)

Query: 40  EILIFAMAALACNLLLGYTGLLSFGQGIFFGAGAYCAALLMIHLQLGLFTALLGAAI-AG 98
           +I+I ++ AL+  LL+G TGL+S G   F+G GAY   +L    + G F  LL  A+ A 
Sbjct: 33  KIMILSIFALSLELLVGMTGLVSLGHAAFYGIGAY-VTVLASGSEGGNFALLLPLAMGAA 91

Query: 99  GFLALLVGALAIRRTGIYFVMLTLAFSQMAYFVAYTLSDWTGGDNGLLSVPRPEIRLGET 158
              AL VGAL++R  G+YF+M+TLAF+QMA+FV +  +   GG +G+    RP   LG  
Sbjct: 92  ALYALFVGALSLRTRGVYFIMVTLAFAQMAFFVFHD-TKVGGGSDGIYMYVRP--ALGAL 148

Query: 159 VLLSLADARAFYAFVAVLFLLIFIGARRVI-ASPFGSTLMAIRENETRASAIGYDTRHFK 217
            L    + R    +V +  L+   G   +I  S FG+ L  IR NE R  A G+    +K
Sbjct: 149 DL----ENRTVLFYVVLASLVFTYGLLALIRRSRFGAALAGIRVNEQRMRAAGFSVYGYK 204

Query: 218 ILVFVLSGAVTGIAGALYAMLLHFVPLSNIDLMMSEN---ILIMTIVGGTGSLFGSLLGA 274
           +  FVL+GA+ G+AG L A     V   N +LM   N   +L+M I+GG G L G+++GA
Sbjct: 205 LAAFVLAGALAGLAGFLLASRDGVV---NPELMAWHNSGEVLLMVILGGLGHLRGAVIGA 261

Query: 275 GSIVLLGDFLS------DLWPRWLMLLGVILILVVIFMRGGLWG 312
            +  LL +  S       L   W + LG+ +I+ V  +  GL G
Sbjct: 262 IAFTLLKEIFSTHAVMGPLADHWQLTLGLTIIVFVALLPKGLIG 305