Pairwise Alignments

Query, 286 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 282 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  209 bits (533), Expect = 4e-59
 Identities = 109/281 (38%), Positives = 172/281 (61%), Gaps = 1/281 (0%)

Query: 6   LFQILNGLGLGMIYFLISVGLTIIFGLLNFVNFAHGAFFLLGAYICYTAVSLTGNFWLAL 65
           +  ILNG   G + +L+++GL +IFGL   VNFAHG+ F+LGAY+ Y A ++ G FW  +
Sbjct: 2   IIHILNGFVYGGLLYLVAIGLVLIFGLRQVVNFAHGSLFMLGAYVGYAATAIAG-FWAGV 60

Query: 66  LIAPLVVAALAWVIERVLIQRIYHLPHMFQILVTLGIALIIQEASVMIWGPVGKSVAVPE 125
           ++A LV+A L  +++R + + +     +  +LVT G+ L+I++    +WG    ++A+P+
Sbjct: 61  VVATLVLAVLGLLLDRAVFRPLQDQDPIVTLLVTFGLLLVIEDLVRTVWGKDTLTIAMPD 120

Query: 126 LLRGVLVVGDFVYPYYRLFLIVFSGLVGLGLWLLLERTRFGALVRAGSESTETVSLLGTN 185
           LL G L +    +P YRLF+I+ +  +G GL L L+R+R G  VRA +    T    G +
Sbjct: 121 LLSGTLRIAGEDFPVYRLFVILVAAGMGAGLTLWLKRSRIGLYVRAFASDPLTTGTQGVD 180

Query: 186 IFRLFSMTFALGVALAGVAGVLFAPLRGAQPFVGPEILGVAFVVVVIGGMGSFSGALVGG 245
             R+ +   ALG   AG+AG++  PL    P +G  IL  +F+VVV+GG GSFSGA V  
Sbjct: 181 TERVSAAVVALGAGFAGLAGIIAGPLLALSPAMGGSILIASFIVVVVGGFGSFSGAFVAA 240

Query: 246 LLVGVVQSLMTTLWPQGASLMIYGAMAVVILVRPYGLFGRA 286
           L++G +Q+L     P  A+++ +  M +++L RP GL GRA
Sbjct: 241 LVIGQLQNLGIVFIPSFATMIPFLLMMLILLWRPLGLTGRA 281