Pairwise Alignments

Query, 400 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 397 a.a., Broad-specificity amino acid ABC transporter, substrate-binding protein from Variovorax sp. SCN45

 Score =  114 bits (285), Expect = 5e-30
 Identities = 107/382 (28%), Positives = 169/382 (44%), Gaps = 14/382 (3%)

Query: 8   KASLTAAAALSLPLSIRSAFAAEPFTFYGLKSMSGAFASY-GKFADMGSRLAVQQHP-QV 65
           K ++ +A +L++ L+  +A A E      +  MS  +A   GK   +  ++A+     +V
Sbjct: 3   KTAVFSAVSLAIALAAGAAQAQEKVKIGFITDMSSLYADVEGKNGALAIQMAIDDFGGKV 62

Query: 66  LGRALNYKVIDTEGNAGKAVRKVQEAIQQDGARFFQGCTLSSSALAVAKEVDKVGGVFMT 125
            G  +     D +  A  A  K +E I   G     G T S + LA+AK   +   VF+ 
Sbjct: 63  NGMPIELLQADHQNKADIAASKAREWIDTQGLTMLFGGTSSGTGLAMAKVAQEKKRVFIV 122

Query: 126 P-VGADEVTGKDCNLATFRWSVPTYGAIRETMVPLIKLLPDAKRWYTITPQYVFGEALLE 184
              G+  +T + C+  T  ++  T    + T   +I      K W+ +T  Y FG+AL  
Sbjct: 123 NGAGSSALTNEQCSPYTVHYAYDTVALAKGTGSAVIAR--GDKSWFFLTADYAFGQALEA 180

Query: 185 GAKNVLKENGLEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQSSNTLRQAVNF 244
            A  V+KE G   +G+  H L   +FS +L  A  +K  VL L N G  + N ++ A  F
Sbjct: 181 DASKVVKEKGGTVVGSVKHPLNTSDFSSFLLQAQNSKAQVLALANAGGDTQNAIKAAKEF 240

Query: 245 GIKERMKV--LLVWSAGLDQFQELGSDVLEGVYLGAQY-WHQVDTPLNRELVKLTQAQYG 301
           GI + MK+  LLV+   +     LG    EG+ L   + W+  D    R   K    +  
Sbjct: 241 GISKTMKMVGLLVF---VTDVHSLGLKNTEGLLLTTSWDWNLDDK--TRAFGKRFFEKTK 295

Query: 302 INPTYPLAADYISTKIMLDTIIATGSFDGPTVAKAMQGLSYEGPTGKESIRAGDHQVIKD 361
             PT   AADY +T   L  + A  S D  TV   ++    +    K  +R  D + + D
Sbjct: 296 RMPTDIQAADYSATMTYLKAVQAAKSIDADTVMAQIKKTPIDDFYAKGFVRE-DGRFVHD 354

Query: 362 YYLLIGKATADMADKDDLAKVL 383
            YL+  K+ A+     D  KV+
Sbjct: 355 MYLVQVKSPAESKQPWDYYKVV 376