Pairwise Alignments

Query, 467 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 485 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  184 bits (466), Expect = 7e-51
 Identities = 144/477 (30%), Positives = 233/477 (48%), Gaps = 21/477 (4%)

Query: 1   MNKRSLYLPALCVLLSACTGNPPAVDSGIAPPAAWQFAERDA-------AQATNQQWWTQ 53
           M+K  L L     +LS C+  P         P A QF +  A       +QA  +Q W Q
Sbjct: 1   MSKSLLSLAVTAFVLSGCSLIPDYQRP--EAPVAAQFPQGPAYSSAQAPSQAAAEQGWKQ 58

Query: 54  F-GSPQLNRLIDQARRDSFDVAAATARVHQAQASAVIAGAPLLPEVKLNLTTSRQKLLRG 112
           F   P L +LI  A  ++ D+  A   +    A   I  A L P V    + SR +    
Sbjct: 59  FFHDPALQQLIQTALVNNRDLRVAALNIDAYAAQYQIQRADLFPAVSATGSGSRSRT--- 115

Query: 113 PGGPDLDASQSDDTVDN-FGANL-TASYEVDFWGGRAAARDSALHNVRASEFDQATVELT 170
              P   +   + T+ + + A L  +SYE+D +G   +  + AL    A+E  + + +++
Sbjct: 116 ---PARLSQTGESTISSQYSAGLGISSYELDLFGRVRSLSEEALQKYFATEEARRSTQIS 172

Query: 171 LLSSVADRYAQTLAAQQRQQIAELNLANARNVLDLVQTRYDAGSATALELAQQKSLVASQ 230
           L++SVA+ Y    A ++  ++ +  L        L     + G A+AL+L+Q ++ V + 
Sbjct: 173 LVASVANAYLTWQADKELLKLTQDTLDAYEQSFKLTSRSNEVGVASALDLSQSRTSVENA 232

Query: 231 QRQLPLIQQLAEESRITLAALLGQPVQALNLGTEPFQALTWPAIGAGLPSQLLSRRPDIA 290
           +  L    +   +   +L  LLG  + A N+ ++P        + AGLPS LL RRPDI 
Sbjct: 233 RVALARYTRQVAQDENSLTLLLGTGLPA-NITSKPLSDDLLSEVPAGLPSDLLQRRPDIV 291

Query: 291 KAEAQLAAAQADVTVARAAMLPAITLGATLGSDAYKAVDVLR--SPYYTLTAGLVAPIFN 348
           +AE  L AA A++  ARAA  P+ITL A+ G+ +     + +  S  ++    +  PIFN
Sbjct: 292 QAEYNLKAANANIGAARAAFFPSITLTASAGTASPNLGGLFKGGSGTWSFAPQINIPIFN 351

Query: 349 NGRLSAERDKARARQDELLQTYRGAIINGFADVEKSLSSITRLDQQREWQSEELQQAQTA 408
            G L A  D ++ +++  +  Y  AI  GF +V   L++     QQ + Q   +   Q  
Sbjct: 352 AGSLRASLDYSKIQKEINVANYEKAIQTGFQEVSDGLAARETYKQQLDAQRGFVAANQDY 411

Query: 409 FQIAESRYQAGAEDLLTVLETQRTLYTAQDQNVQLRLSRLQASIALYKALGGGWQTQ 465
           +++AE RY+ G +  LT L+ QR L++AQ   +  RL++L + + LYKALGGGW  Q
Sbjct: 412 YRLAERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWNEQ 468