Pairwise Alignments

Query, 467 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 498 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  193 bits (491), Expect = 1e-53
 Identities = 137/439 (31%), Positives = 223/439 (50%), Gaps = 11/439 (2%)

Query: 26  DSGIAPPAAWQFAERDAAQATNQQWWTQFGSPQLNRLIDQARRDSFDVAAATARVHQAQA 85
           D G  PPA +  A    +Q     WW  F  P LN L+++A   + D+ AA AR+ +A+A
Sbjct: 50  DQGATPPAGFTRAVPSESQPRGA-WWLAFNDPTLNALVEKADIHNNDIQAAAARLAEARA 108

Query: 86  SAVIAGAPLLPEVKLNLTTSRQKLLRGPGGPDLDASQSDDTVDNFGANLTASYEVDFWGG 145
            A  A A  LP++ L    +R     G G     AS    T+ N GA  T SYEVD +G 
Sbjct: 109 LARTADADRLPQIGLGAGANR-----GAGLDKATASTRPATMTNIGA--TFSYEVDLFGR 161

Query: 146 RAAARDSALHNVRASEFDQATVELTLLSSVADRYAQTLAAQQRQQIAELNLANARNVLDL 205
            + A  +A  +    E    +  L + +  A  Y Q  A    + +    +   R+ L L
Sbjct: 162 LSGASKAARLDAAGREALLQSTRLAVQAQTAQTYLQLRALDAERALVREQVEAYRDTLRL 221

Query: 206 VQTRYDAGSATALELAQQKSLVASQQRQLPLIQQLAEESRITLAALLGQPVQALNLGTEP 265
            Q R  AG    L++A+ ++ V+S +     + +   +    LA L+G    +  L T+ 
Sbjct: 222 SQRREQAGDIAELDVARVQTEVSSTESDALALDRQRAQVEHALAVLVGDSASSFGLRTDE 281

Query: 266 FQALTWPAIGAGLPSQLLSRRPDIAKAEAQLAAAQADVTVARAAMLPAITLGATLGSDAY 325
           +  +  P I AG+PS +L RRPD++ A++ + AAQA V VA+AA  P I+L    G  + 
Sbjct: 282 WSTVL-PNIPAGVPSTVLMRRPDVSAAQSAVLAAQARVGVAQAAWFPDISLTGAAGYASP 340

Query: 326 KAVDVLR--SPYYTLTAGLVAPIFNNGRLSAERDKARARQDELLQTYRGAIINGFADVEK 383
           +  D+ +  +  + + A L  PIF+ GR  A    A A+ D  L +YR   +  F +VE 
Sbjct: 341 EIGDLFKWSARSWGVGALLSLPIFDGGRREAGVQGANAQLDGALASYRTQALVAFQEVED 400

Query: 384 SLSSITRLDQQREWQSEELQQAQTAFQIAESRYQAGAEDLLTVLETQRTLYTAQDQNVQL 443
            L++I  L +Q   Q++ +  AQ A  ++++RY+ G    L +L+ +R+    + Q +Q+
Sbjct: 401 QLAAIRILQEQSVVQAQAVTSAQRATSLSDTRYRNGYISQLDLLDARRSELRNRRQALQV 460

Query: 444 RLSRLQASIALYKALGGGW 462
           + ++ QA++AL +A+GGGW
Sbjct: 461 KSAQYQAAVALVRAIGGGW 479