Pairwise Alignments

Query, 467 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 470 a.a., outer membrane pyoverdine efflux protein from Pseudomonas putida KT2440

 Score =  514 bits (1324), Expect = e-150
 Identities = 269/457 (58%), Positives = 344/457 (75%), Gaps = 3/457 (0%)

Query: 8   LPALCVLLSACTGNPPAVDSGIAPPAAWQFAERDAAQAT-NQQWWTQFGSPQLNRLIDQA 66
           LP    LL+  T  PP +  GIAPPA WQ      AQA  +Q+WW  F SP+L++LI+ A
Sbjct: 10  LPLSLSLLACSTPTPPTM--GIAPPAGWQSPTASKAQALPDQRWWKAFASPELDQLIEIA 67

Query: 67  RRDSFDVAAATARVHQAQASAVIAGAPLLPEVKLNLTTSRQKLLRGPGGPDLDASQSDDT 126
           R +S D+AAA ARV QAQA AVIAGAPLLPEV+  L  SRQ+LLRG G   LDAS S+ T
Sbjct: 68  RNNSHDLAAAAARVRQAQARAVIAGAPLLPEVQFGLDASRQRLLRGEGNDQLDASSSERT 127

Query: 127 VDNFGANLTASYEVDFWGGRAAARDSALHNVRASEFDQATVELTLLSSVADRYAQTLAAQ 186
             +F ANL+ASYE+DFWGG  +ARDSAL ++ AS  D+ TV+LTL  SVAD Y Q+LA +
Sbjct: 128 STSFDANLSASYEIDFWGGLRSARDSALRSLDASRLDRQTVKLTLFGSVADTYLQSLALK 187

Query: 187 QRQQIAELNLANARNVLDLVQTRYDAGSATALELAQQKSLVASQQRQLPLIQQLAEESRI 246
           ++ +IA+LNL NA+ VL LV+ R  +GS+T LELAQQ+SLVA+QQRQLPL++Q  +++++
Sbjct: 188 EQLRIAQLNLRNAQAVLSLVEARQQSGSSTQLELAQQRSLVAAQQRQLPLLEQQWQDTQV 247

Query: 247 TLAALLGQPVQALNLGTEPFQALTWPAIGAGLPSQLLSRRPDIAKAEAQLAAAQADVTVA 306
           TLA LLG PVQ L   T  F  L WP I +G+PS+LL+RRPDIA AEA+LAAA A+V VA
Sbjct: 248 TLATLLGLPVQQLPTSTAAFADLRWPRIASGVPSELLARRPDIAAAEARLAAASANVQVA 307

Query: 307 RAAMLPAITLGATLGSDAYKAVDVLRSPYYTLTAGLVAPIFNNGRLSAERDKARARQDEL 366
           RAA+LP +TLG   GS A     +  SPYYTLT+GLVAP+FN GRL A +  A A Q+EL
Sbjct: 308 RAALLPKLTLGVEFGSGASTFAQIFDSPYYTLTSGLVAPVFNRGRLRAAQQLAEAEQEEL 367

Query: 367 LQTYRGAIINGFADVEKSLSSITRLDQQREWQSEELQQAQTAFQIAESRYQAGAEDLLTV 426
           L+ YR +I+  FADVEK+L++   +D+QR+WQ +E++Q++ AFQ+AE RY+AGAE LLTV
Sbjct: 368 LEAYRTSILAAFADVEKALNATQGVDRQRQWQDQEVEQSRIAFQLAERRYRAGAETLLTV 427

Query: 427 LETQRTLYTAQDQNVQLRLSRLQASIALYKALGGGWQ 463
           L+TQR+LY AQDQ  +L+LS+LQAS+ALYKALGGGWQ
Sbjct: 428 LDTQRSLYQAQDQQARLQLSQLQASVALYKALGGGWQ 464



 Score = 40.0 bits (92), Expect = 2e-07
 Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 22/212 (10%)

Query: 51  WTQFGSPQLNRLIDQARRDSFDVAAATARVHQAQASAVIAGAPLLPEVKLNLTTSRQKLL 110
           W +  S   + L+  ARR   D+AAA AR+  A A+  +A A LLP++ L +        
Sbjct: 272 WPRIASGVPSELL--ARRP--DIAAAEARLAAASANVQVARAALLPKLTLGVEFG----- 322

Query: 111 RGPGGPDLDASQSDDTVDNFGANLTASYEVDFWGGRAAARDSALHNVRASEFDQA--TVE 168
               G    A   D       + L A     F  GR  A    L      E  +A  T  
Sbjct: 323 ---SGASTFAQIFDSPYYTLTSGLVAPV---FNRGRLRAAQQ-LAEAEQEELLEAYRTSI 375

Query: 169 LTLLSSVADRYAQTLAAQQRQQIAELNLANARNVLDLVQTRYDAGSATALE-LAQQKSLV 227
           L   + V      T    +++Q  +  +  +R    L + RY AG+ T L  L  Q+SL 
Sbjct: 376 LAAFADVEKALNATQGVDRQRQWQDQEVEQSRIAFQLAERRYRAGAETLLTVLDTQRSLY 435

Query: 228 ASQQRQLPLIQQLAE-ESRITLAALLGQPVQA 258
            +Q +Q  L  QL++ ++ + L   LG   QA
Sbjct: 436 QAQDQQARL--QLSQLQASVALYKALGGGWQA 465