Pairwise Alignments

Query, 467 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 484 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

 Score =  202 bits (513), Expect = 3e-56
 Identities = 145/465 (31%), Positives = 222/465 (47%), Gaps = 15/465 (3%)

Query: 11  LCVLLSACTGNPPAVDSGIAPPAAWQFAERDAAQATNQ------QWWTQFGSPQLNRLID 64
           L VLL+ CT  P         P  W   + +AA +  Q      +WW  F   +L+ LI 
Sbjct: 12  LAVLLTGCTLGPDFQRPDSQAPQQWAPLQGEAAASQPQAEPLELRWWETFHDARLSALIQ 71

Query: 65  QARRDSFDVAAATARVHQAQASAVIAGAPLLPEVKLNLTTSRQKLLRGPGGPDLDASQSD 124
           +    + D+  A+AR+ Q++A      A  +P V +N   SR +     G  D       
Sbjct: 72  RVAERNLDLQMASARLLQSRALRSTLAADEVPSVDVNAGYSRARN-SADGLSDPSGKAGK 130

Query: 125 DTVDNFGANLTASYEVDFWGGRAAARDSALHNVRASEFDQATVELTLLSSVADRYAQTLA 184
           +  + +  +L A +E+D WG      ++A   V  +E D+  V L LLS  A  Y Q  A
Sbjct: 131 EAFNLWQGDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGNYIQLRA 190

Query: 185 AQQRQQIAELNLANARNVLDLVQTRYDAGSATALELAQQKSLVASQQRQLPLIQQLAEES 244
            Q    + + NL  AR+ L L Q R   G AT L++AQ  + VAS + +LP ++   ++ 
Sbjct: 191 VQHTLDVTQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIESRLPSLEAQRDDL 250

Query: 245 RITLAALLGQPVQALNLGTEPFQALTWPA----IGAGLPSQLLSRRPDIAKAEAQLAAAQ 300
              L+ L  +P ++L    E  Q    PA       GLPS+L  RRPDI +AEA+L AA 
Sbjct: 251 INALSLLAAEPPRSLQ--AELLQGGELPAPQQKFAIGLPSELAERRPDIRQAEARLHAAT 308

Query: 301 ADVTVARAAMLPAITLGATLGSDAYKAVDV--LRSPYYTLTAGLVAPIFNNGRLSAERDK 358
           A + VA+A   P+I L  ++G  A +  D     S  +     +  PIF  GRL    + 
Sbjct: 309 ASIGVAKADFYPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSLPIFEGGRLKGTLEL 368

Query: 359 ARARQDELLQTYRGAIINGFADVEKSLSSITRLDQQREWQSEELQQAQTAFQIAESRYQA 418
             A+Q E    YR  ++  + +++  L        +R+  +E ++Q + A + A+ +Y  
Sbjct: 369 REAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQRQYVE 428

Query: 419 GAEDLLTVLETQRTLYTAQDQNVQLRLSRLQASIALYKALGGGWQ 463
           GA D L VL  Q  L  +++Q +    +  QA + LYKALGGGWQ
Sbjct: 429 GAVDFLNVLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGWQ 473