Pairwise Alignments

Query, 467 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 507 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Enterobacter asburiae PDN3

 Score =  193 bits (490), Expect = 1e-53
 Identities = 150/497 (30%), Positives = 231/497 (46%), Gaps = 43/497 (8%)

Query: 1   MNKRSLYLPALCVLLSACTGNPPAVDSGIAPPAAWQFAERD--------AAQATNQQWWT 52
           M  R L+   + +LL+ C   P       APPA   + ++          + ATN +WW 
Sbjct: 1   MIHRRLHPLMIMMLLAGCAVGPDYQQP--APPAVTHWNDKGDSAVKSQTTSAATNPRWWK 58

Query: 53  QFGSPQLNRLIDQARRDSFDVAAATARVHQAQASAVIAGAPLLPEVKLNLTTSRQKL-LR 111
            FGSPQL+ L+++A   +  +     R+  A+     AG    P V  NL  +RQ+L L 
Sbjct: 59  TFGSPQLDSLVERAIAGNLTLQQTVLRIAGAREQINQAGGAFYPSVNGNLQATRQQLGLE 118

Query: 112 GPGGPDLDASQSDDTVDNFGANLT------------------ASYEVDFWGGRAAARDSA 153
           G    +L +    D VD+   NL                   A +E+D WG      ++A
Sbjct: 119 G----ELKSHGVYDQVDSIDPNLKGALGPLTQPINLYQGSFDAQWEIDLWGKVRRQVEAA 174

Query: 154 LHNVRASEFDQATVELTLLSSVADRYAQTLAAQQRQQIAELNLANARNVLDLVQTRYDAG 213
               +A+   +    ++L + VA  + Q   AQ         + +A+  LDL ++R   G
Sbjct: 175 EAQQKAAIEQRNDALVSLEAEVARAWLQLRGAQSIIATLNTQIKSAQQTLDLTESRQRGG 234

Query: 214 SATALELAQQKSLVASQQRQLPLIQQLAEESRITLAALLGQPVQALNL---GTEPFQALT 270
            +  +++   ++ + + + QLP  Q    ++   LA LLG+P  AL+      +P  AL 
Sbjct: 235 LSPQMDVENARAQLGNLEAQLPQYQAQERQAMNGLAILLGKPPGALDAELQSVQPMPALP 294

Query: 271 WPAIGAGLPSQLLSRRPDIAKAEAQLAAAQADVTVARAAMLPAITLGATLG---SDAYKA 327
              +  G+PS L  RRPD+ +AEA L AA A + V+ A + P+ TL    G   S+    
Sbjct: 295 -DIVQTGIPSTLARRRPDVREAEANLHAATAQIGVSVAELFPSFTLSGQFGLRNSETNWL 353

Query: 328 VDVLRSPYYTLTAGLVAPIFNNGRLSAERDKARARQDELLQTYRGAIINGFADVEKSLSS 387
            D   S +Y+    +  PIF  GRL +    ARA+Q   +  YR  ++    DVE +L S
Sbjct: 354 TD-WSSHFYSFGPQVSIPIFQGGRLVSSVKVARAQQGAAVLDYRQTVLTALGDVENALVS 412

Query: 388 ITRLDQQRE-WQSEELQQAQTAFQIAESRYQAGAEDLLTVLETQRTLYTAQDQNVQLRLS 446
             R DQQRE   ++ +   Q AF +A   Y+ G    + VL+ QR L  AQ Q  Q ++ 
Sbjct: 413 Y-RTDQQREAGLAKTIDALQNAFDLASDSYRQGIASFIDVLDAQRQLAQAQQQRAQAQVQ 471

Query: 447 RLQASIALYKALGGGWQ 463
                +ALYKALGGGW+
Sbjct: 472 SALDLVALYKALGGGWE 488



 Score = 41.2 bits (95), Expect = 8e-08
 Identities = 54/202 (26%), Positives = 78/202 (38%), Gaps = 17/202 (8%)

Query: 72  DVAAATARVHQAQASAVIAGAPLLPEVKLNLTTSRQKLLRGPGGPDLDASQSDDTVDNFG 131
           DV  A A +H A A   ++ A L P    + T S Q  LR      L    S     +FG
Sbjct: 311 DVREAEANLHAATAQIGVSVAELFP----SFTLSGQFGLRNSETNWLTDWSSH--FYSFG 364

Query: 132 ANLTASYEVDFWGGRAAARDSALHNVR-ASEFDQATVELTLLSSVADRYAQTLAAQQRQQ 190
             ++      F GGR  +        + A+  D     LT L  V +        QQR+ 
Sbjct: 365 PQVSIPI---FQGGRLVSSVKVARAQQGAAVLDYRQTVLTALGDVENALVSYRTDQQREA 421

Query: 191 IAELNLANARNVLDLVQTRYDAGSATALELAQQKSLVASQQRQLPLIQQLAEESRITLAA 250
                +   +N  DL    Y  G A+ ++       V   QRQL   QQ   ++++  A 
Sbjct: 422 GLAKTIDALQNAFDLASDSYRQGIASFID-------VLDAQRQLAQAQQQRAQAQVQSAL 474

Query: 251 LLGQPVQALNLGTEPFQALTWP 272
            L    +AL  G EP+Q +  P
Sbjct: 475 DLVALYKALGGGWEPYQQVQLP 496