Pairwise Alignments

Query, 656 a.a., macrolide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 402 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  224 bits (570), Expect = 8e-63
 Identities = 141/395 (35%), Positives = 213/395 (53%), Gaps = 11/395 (2%)

Query: 272 AWRVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIYLSGTSPN 331
           A R +  N  R+ LT+LG++IGVA+V+ M+ +G G+  QV +++   G+N++++      
Sbjct: 9   ALRAISRNLLRSFLTVLGVVIGVAAVIAMVTIGNGTTEQVKSELSRLGTNMLFVRPGQFG 68

Query: 332 P-RTPLGIVTLDDVHALAALPQVQRIMPV----NGSEVGVRFSNVDYMAYVGGNDTNFPE 386
           P R        DD    A   Q+  I  V      S   V F   ++   V G   ++  
Sbjct: 69  PGRASTEAKRFDDRDVEAIRNQISGIRAVAPQNRSSAATVIFGGKNHQTSVIGTTNDYLI 128

Query: 387 IFNWPVVEGNYFTAADERAAATVAVIGHRVREKLFKGEVNPIGQYILIENVPFQVIGVLA 446
             +W +  G  F  A++R      +IG  VR++LF  E NP+GQ I + N+   VIGVLA
Sbjct: 129 AQDWTIALGRDFQPAEDRGGQIGCIIGETVRQELFGAE-NPVGQTIRVSNISCPVIGVLA 187

Query: 447 EKGAASGNKDSDDRVAIPYTAASVRLFGNYNPEYVVIAAADARKVRETEVAIDQLMQ--- 503
            KG +    D DD + +P      R+ G      ++++A D     + +  +  L++   
Sbjct: 188 RKGQSGLGDDQDDTIIMPLKIHQRRIGGTTTISSIMVSAQDGVSTAKVQSDLQNLLRERR 247

Query: 504 KLHNGKRDYELTNNAAMI-QAEARTQNTLSLMLGSIAAISLLVGGIGVMNIMLMTVRERT 562
           +++ G+ D    N+   I  A   T   L+ +LG++AA+SLLVGGIG+MNIML++V ERT
Sbjct: 248 RINIGREDDFTVNDMTQIASAMTGTTTLLTGLLGAVAAVSLLVGGIGIMNIMLVSVTERT 307

Query: 563 REIGIRMATGARQRDILRQFLTEAVMLSVVGGLCGIALAL-LVGGVLVLAKVAVQFSLLA 621
           REIGIR+A GA ++ +L QFL EAVMLS  GG+ GI   L L   V+    V    S   
Sbjct: 308 REIGIRLAIGALEKQVLTQFLVEAVMLSAFGGIVGILTGLGLAYSVVSFLNVPFVTSPSI 367

Query: 622 VFGAFGCALVTGVVFGFMPARKAARLDPVKALTSE 656
           +F AF  +   GV+FG+ PAR+AA L P++AL  E
Sbjct: 368 IFLAFAFSAAIGVIFGYFPARRAASLSPIEALRHE 402



 Score = 24.6 bits (52), Expect = 0.009
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)

Query: 568 RMATGARQRDILRQFLTEAVMLSVVGGLCGIALALLVG 605
           R+A  A  R++LR FLT   +L VV G+  +   + +G
Sbjct: 7   RLALRAISRNLLRSFLT---VLGVVIGVAAVIAMVTIG 41