Pairwise Alignments

Query, 389 a.a., hemolysin secretion protein D from Pseudomonas simiae WCS417

Subject, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

 Score = 98.2 bits (243), Expect = 4e-25
 Identities = 95/351 (27%), Positives = 158/351 (45%), Gaps = 39/351 (11%)

Query: 39  VTVTRGSIENSVTALGTLQPRRYVDVGAQASGQIRKIHVEAGDQVEEGQLLVEIDPSTQK 98
           V V  G       ALGT+     V+V ++ +G++ KIH + G +V+ G LL EIDP   +
Sbjct: 70  VPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPYR 129

Query: 99  AKLDASRYAIENLKAQLQEQKAQHELARQKYQRQQRLTAANATREEDVQTAKAELSATQA 158
             L  +   +   +AQL  + AQ +LAR K      L A ++  ++ + TA+A+++  Q 
Sbjct: 130 IALQQAEGTLAQNQAQL--KNAQVDLARYK-----GLYAEDSIAKQTLDTAEAQVAQFQG 182

Query: 159 RVDMFQAQILQAQASLRSDEAELGYTRIYAPMTGTVVAVDARVGQTLNAQQQTPLILRIA 218
            V   QAQ+  A+ +       L +T+I AP++G V      +G  + A   T L++ I 
Sbjct: 183 LVKTNQAQVNDARLN-------LDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVV-IT 234

Query: 219 KLSPMTVWAEVSEADIGHV----KPGMTAYFTTLSGGNRRWTSTVRQILPIPPKPLNETQ 274
           +  P+ V   + E ++  V    + G +        G+ +  ST   +L      ++ T 
Sbjct: 235 QTEPINVAFTLPETELSTVLERYRSGASLPVEAWDRGDSKLQST--GVLGSIDNQIDTTT 292

Query: 275 GSGSPNSTSKSGSGRVVLYTVLLDVDNSDNALMAEMTTQVFFVASQVKDALTAPVAALSG 334
           G       +    GR          +N D AL       V  +A  +K  + AP AA+  
Sbjct: 293 G-------TLKFKGR---------FENKDLALFPNQFVNVRLLADTLKQVVMAPAAAIQ- 335

Query: 335 TANANQQIAQVVGKNGRIEQRQVQVGISDRLRVQVLDGLSEGDHLLIGPAD 385
               +   A VV +   +  R+++VG SD     +LDGL  GD L++   D
Sbjct: 336 -FGNDGTFAYVVNEQSTVNVRKLKVGASDGENSVILDGLKAGDRLVLEGTD 385