Pairwise Alignments

Query, 160 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  215 bits (548), Expect = 2e-61
 Identities = 107/158 (67%), Positives = 126/158 (79%)

Query: 2   LENYYRELVCFLNAKLGNRQVAEDVVHDAYVRVLERSSDTPIEQPRAFLYRTALNLVIDG 61
           +E+YYRELV FL+A+LG+RQ AEDV HDAY+RVLER+    IE PRAFLYRTALNLV+D 
Sbjct: 1   MEHYYRELVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDR 60

Query: 62  HRRNALRQVEPLDVLDAEERFASSSPHTHHDHGQRLELLERALAELPPACRDSFLLRKLE 121
           HRR  +RQ EPLD LDA+ R  SS         QRL L+++AL EL   CRDSFLLRK+E
Sbjct: 61  HRRQLVRQAEPLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIE 120

Query: 122 GLTHLQIAERLSISRAMVEKHIVNAMKHCRVRMREWET 159
           GL+H QIAERL ISR++VEKHIVNAMKHCRVRMR+WE+
Sbjct: 121 GLSHQQIAERLGISRSLVEKHIVNAMKHCRVRMRQWES 158