Pairwise Alignments

Query, 160 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

 Score =  117 bits (292), Expect = 1e-31
 Identities = 63/148 (42%), Positives = 93/148 (62%), Gaps = 2/148 (1%)

Query: 4   NYYRELVCFLNAKLGNRQVAEDVVHDAYVRVLERSSDTPIEQPRAFLYRTALNLVIDGHR 63
           ++Y EL+     KL +RQ AED+ HDA+VRVLE   +  +EQPRA+L++ A N+ +DG R
Sbjct: 9   DHYHELIGTWTRKLRSRQQAEDLTHDAFVRVLETPREQ-VEQPRAYLHQAARNIAVDGFR 67

Query: 64  RNALRQVEPLDVLDAEERFASSSPHTHHDHGQRLELLERALAELPPACRDSFLLRKLEGL 123
           R   RQ    +  + E    S  P  +    +  + +ERALAELP  CR  F+ +KLEGL
Sbjct: 68  REDRRQALEREAFE-EGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQKLEGL 126

Query: 124 THLQIAERLSISRAMVEKHIVNAMKHCR 151
           T  +IAER+ +S+ MVEK+++  ++H R
Sbjct: 127 TQAEIAERMGLSKNMVEKYMIRTLRHLR 154