Pairwise Alignments

Query, 469 a.a., proline-specific permease from Pseudomonas simiae WCS417

Subject, 468 a.a., D-alanine, beta-alanine, D-serine, glycine permease from Pseudomonas putida KT2440

 Score =  358 bits (918), Expect = e-103
 Identities = 182/446 (40%), Positives = 277/446 (62%), Gaps = 4/446 (0%)

Query: 5   EKGLKRGLSARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIGGAAVFMVMRALG 64
           E  L+R L+ RHI+ +A+G AIGTGLF GS   I +AGP+++  Y+I G  +F VMRA+G
Sbjct: 11  EPHLQRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMG 70

Query: 65  EMAVHNPVAGSFGQYASTYLGPMAGFILGWTYAFEMIIVCLADVTAFGIYMGFWFPDVAR 124
           E+ + N    SF  +++  LGP AG+  GWTY F  ++  +ADV A   Y  FWFPD+ +
Sbjct: 71  ELLLSNLNYKSFIDFSADLLGPWAGYFTGWTYWFCWVVTGIADVVAIAAYTQFWFPDLPQ 130

Query: 125 WVWVLGIVLLIGGLNLCNVKVFGEMEFWLSLLKVGAIVAMILGGFGIMLFGIHSAGETQA 184
           W+  L  V L+  LNL  VK+FGE+EFW +L+K+ AI+ ++  G  +++ G  S     A
Sbjct: 131 WIPALTCVGLLLSLNLVTVKMFGELEFWFALVKIVAILGLVATGLYMVITGFTSPSGRTA 190

Query: 185 SGLSNLWAHGGFMPNGIGGLIASFAVVMFAFGGIEIIGITAGEAKDPQRVIPKAINAVPL 244
             L+NLW  GG  P+G+ G  A F + +FAF GIE++G TA EAK+P+R +P+AIN++P+
Sbjct: 191 Q-LANLWNDGGMFPHGLMGFFAGFQIAVFAFVGIELVGTTAAEAKNPERTLPRAINSIPI 249

Query: 245 RILLFYVLTLFVLMAIYPWPQIGSQGSPFVQIFSNLGIGSAATILNIVVISAAVSAINSD 304
           RI++FYVL L  +MA+ PW  +    SPFV++F   G+ +AA+I+N VV+++A S+ NS 
Sbjct: 250 RIIVFYVLALIAIMAVTPWRDVVPGKSPFVELFVLAGLPAAASIINFVVLTSAASSANSG 309

Query: 305 IFGAGRMMYGLAQQGQAPKGFAQLSKQGVPWMTVVVMGAALLGGVVLNYLIPENV--FLV 362
           +F   RM+YGL+Q+G APK F +LS + VP   +      LL G VL YL+P  V  F +
Sbjct: 310 VFSTSRMLYGLSQEGDAPKAFEKLSSRSVPANGLYFSCTCLLLGAVLIYLVPNVVEAFTL 369

Query: 363 IASIATFATVWVWLMILFTQVAMRRSMTKEQVAELKFPVPFWPYAPAAAIVFMLFVFGVL 422
           + +++    ++VW +IL + +  R+       A   + +P   +     + F  F+  +L
Sbjct: 370 VTTVSAVLFMFVWTLILLSYLKYRKDRAALHQAS-NYKMPGGRFMCYVCLSFFAFILVLL 428

Query: 423 GYFPDTQAALLVGAVWIVLLVVAYLL 448
               DT++AL+V  +W V+L V Y L
Sbjct: 429 SLEADTRSALVVTPIWFVVLAVTYQL 454