Pairwise Alignments

Query, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 260 a.a., lysine-arginine-ornithine-binding periplasmic protein from Enterobacter asburiae PDN3

 Score =  202 bits (513), Expect = 7e-57
 Identities = 113/256 (44%), Positives = 160/256 (62%), Gaps = 5/256 (1%)

Query: 7   LFAALLLPLCATA--HAQEWKEIRFGVFPEYPPFESVAADGSLQGFDIELGNAICAKLEV 64
           L  +LL+ L A A  +A   + +R G    Y PF S  A G   GFDI+LGN +C ++ V
Sbjct: 6   LALSLLVGLSAAAGSYAALPQTVRIGTDATYAPFSSKDAKGDFVGFDIDLGNEMCKRIAV 65

Query: 65  KCTWVHNEFDGMIPALRARKFDAIMSSMAVTPAREKIIDFSDRLFLSPTSVITRKSADFG 124
           KCTWV ++FD +IP+L+A+K DAI+SS+++T  R++ I FSD+L+ + + +I  K +   
Sbjct: 66  KCTWVGSDFDALIPSLKAKKIDAIISSLSITEKRQQEIAFSDKLYAADSRLIAPKGSPIK 125

Query: 125 DTPESLMGKQVGVLQGSLQEAYARAHLAKLGAQIKAYQSQDQNYADLQNGRLDATLTDKL 184
            T +SL GK VGVLQGS QE YA A   + G  + AYQ+QD  Y+DL  GRLDA   D++
Sbjct: 126 PTIDSLKGKHVGVLQGSTQEGYANATWREKGVDVVAYQNQDLIYSDLAAGRLDAAFQDEV 185

Query: 185 EAQLNFLSKPEGSDFK-TGPAFKDPTLPLD-IAMGLRKNDQALRALINKGIAAVQADGTY 242
            A   FL +P G D+   GP+ KD     D   +GLRK+D  L+A  +K  A ++ DGTY
Sbjct: 186 AASEGFLKQPAGKDYAFAGPSVKDKKYFGDGTGIGLRKDDTELKAAFDKAFAELRKDGTY 245

Query: 243 AQIQKKYFGDQDIYHE 258
            ++ KKYF D ++Y E
Sbjct: 246 DKLAKKYF-DFNVYGE 260