Pairwise Alignments

Query, 319 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 658 a.a., conserved exported protein of unknown function with YVTN beta-propeller repeat from Pseudomonas putida KT2440

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 19/281 (6%)

Query: 29  DNSLSLID--MQTLQVTDTL---KVGQRPRGLLLSHDNKLLYICASDSDRVQVMDVATRK 83
           D SL++ID  +    VT T+   ++  RP     + D+K +++   +  +V V+D  T  
Sbjct: 143 DASLTVIDPTVSVGGVTSTMARIELPGRPMDWAATSDDKQVFVSIPERGKVSVIDTETFT 202

Query: 84  IIKELPSGKDPEQFALHPNNRWLYVSNEDD----ALVTVIDTETAKVLGQINVGVEPEGM 139
            + +L +G  P + AL P+   L+V N         VTVID      +   N G     +
Sbjct: 203 RVADLDAGDQPLRVALQPDQHRLWVGNNSSDPAKGGVTVIDVPGRSAMKHFNTGTGHHEI 262

Query: 140 AVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLVDQRPRFVEFNHDGSQLWASAEIGGT 199
           A S D ++A  ++  +  L  ID     LA +  V   P  V ++     ++      G+
Sbjct: 263 AFSADSRYAYVSNRDSGTLSVIDIPEMRLAKTIKVGPHPLSVSYSALSQAVYVVDGEEGS 322

Query: 200 VTILDVASRAILKTLTFSIKGVHPDKVQPVGIKLSADGKYGFVALGPANHVAVIDAKTFE 259
           V + D  S  +  T+  + +G+ P       ++ S DG+YG V     N   VIDA T +
Sbjct: 323 VRVFDARSHQLRHTVQ-AEQGLGP-------MRFSHDGRYGIVLNTLENQALVIDASTDK 374

Query: 260 VLDYLLVGRRVWQMAFTPDEKQLLVTNGVSGDVSVIDVDSL 300
           ++ ++ V    +Q+ FT  +    V    S  VS+I++ SL
Sbjct: 375 LIHHIPVAAEPYQLTFT--KGYAYVRGLASPKVSMINLASL 413



 Score = 53.5 bits (127), Expect = 1e-11
 Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 17/214 (7%)

Query: 103 NRWLYVSNEDDALVTVIDTETA-----KVLGQINVGVEPEGMAVSPDGKWAVNTSETTNM 157
           N +  +   +DA +TVID   +       + +I +   P   A + D K    +      
Sbjct: 133 NSYFLLMLNNDASLTVIDPTVSVGGVTSTMARIELPGRPMDWAATSDDKQVFVSIPERGK 192

Query: 158 LHWIDTSTQTLADSTLVDQRPRFVEFNHDGSQLW----ASAEIGGTVTILDVASRAILKT 213
           +  IDT T T         +P  V    D  +LW    +S    G VT++DV  R+ +K 
Sbjct: 193 VSVIDTETFTRVADLDAGDQPLRVALQPDQHRLWVGNNSSDPAKGGVTVIDVPGRSAMKH 252

Query: 214 LTFSIKGVHPDKVQPVGIKLSADGKYGFVALGPANHVAVIDAKTFEVLDYLLVGRRVWQM 273
                 G H        I  SAD +Y +V+   +  ++VID     +   + VG     +
Sbjct: 253 FNTGT-GHHE-------IAFSADSRYAYVSNRDSGTLSVIDIPEMRLAKTIKVGPHPLSV 304

Query: 274 AFTPDEKQLLVTNGVSGDVSVIDVDSLKVIKSVK 307
           +++   + + V +G  G V V D  S ++  +V+
Sbjct: 305 SYSALSQAVYVVDGEEGSVRVFDARSHQLRHTVQ 338



 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 4/117 (3%)

Query: 22  AWVSNEKDNSLSLIDMQTLQVTDTLKVGQRPRGLLLSHDNKLLYICASDSDRVQVMDVAT 81
           A+VSN    +LS+ID+  +++  T+KVG  P  +  S  ++ +Y+   +   V+V D  +
Sbjct: 271 AYVSNRDSGTLSVIDIPEMRLAKTIKVGPHPLSVSYSALSQAVYVVDGEEGSVRVFDARS 330

Query: 82  RKI--IKELPSGKDPEQFALHPNNRWLYVSNEDDALVTVIDTETAKVLGQINVGVEP 136
            ++    +   G  P +F+   + R+  V N  +    VID  T K++  I V  EP
Sbjct: 331 HQLRHTVQAEQGLGPMRFS--HDGRYGIVLNTLENQALVIDASTDKLIHHIPVAAEP 385



 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 50/207 (24%), Positives = 76/207 (36%), Gaps = 46/207 (22%)

Query: 23  WVSNEKDNSLSLIDMQTLQVTDTLKVGQRPRGLLLSHDNKLLYICASDSDR----VQVMD 78
           +VS  +   +S+ID +T      L  G +P  + L  D   L++  + SD     V V+D
Sbjct: 184 FVSIPERGKVSVIDTETFTRVADLDAGDQPLRVALQPDQHRLWVGNNSSDPAKGGVTVID 243

Query: 79  VATRKIIKELPSGKDPEQFALHPNNRWLYVSNEDDALVTVIDTETAKVLGQINVGVEP-- 136
           V  R  +K   +G    + A   ++R+ YVSN D   ++VID    ++   I VG  P  
Sbjct: 244 VPGRSAMKHFNTGTGHHEIAFSADSRYAYVSNRDSGTLSVIDIPEMRLAKTIKVGPHPLS 303

Query: 137 ----------------EG------------------------MAVSPDGKWAVNTSETTN 156
                           EG                        M  S DG++ +  +   N
Sbjct: 304 VSYSALSQAVYVVDGEEGSVRVFDARSHQLRHTVQAEQGLGPMRFSHDGRYGIVLNTLEN 363

Query: 157 MLHWIDTSTQTLADSTLVDQRPRFVEF 183
               ID ST  L     V   P  + F
Sbjct: 364 QALVIDASTDKLIHHIPVAAEPYQLTF 390



 Score = 45.8 bits (107), Expect = 3e-09
 Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 12/143 (8%)

Query: 177 RPRFVEFNHDGSQLWASAEIGGTVTILDVASRAILKTLTFSIKGVHPDKVQPVGIKLSAD 236
           RP       D  Q++ S    G V+++D        T TF+         QP+ + L  D
Sbjct: 170 RPMDWAATSDDKQVFVSIPERGKVSVID--------TETFTRVADLDAGDQPLRVALQPD 221

Query: 237 GKYGFVALGPANH----VAVIDAKTFEVLDYLLVGRRVWQMAFTPDEKQLLVTNGVSGDV 292
               +V    ++     V VID      + +   G    ++AF+ D +   V+N  SG +
Sbjct: 222 QHRLWVGNNSSDPAKGGVTVIDVPGRSAMKHFNTGTGHHEIAFSADSRYAYVSNRDSGTL 281

Query: 293 SVIDVDSLKVIKSVKVGRYPWGV 315
           SVID+  +++ K++KVG +P  V
Sbjct: 282 SVIDIPEMRLAKTIKVGPHPLSV 304



 Score = 35.4 bits (80), Expect = 4e-06
 Identities = 18/80 (22%), Positives = 42/80 (52%)

Query: 17  AVASTAWVSNEKDNSLSLIDMQTLQVTDTLKVGQRPRGLLLSHDNKLLYICASDSDRVQV 76
           A++   +V + ++ S+ + D ++ Q+  T++  Q    +  SHD +   +  +  ++  V
Sbjct: 308 ALSQAVYVVDGEEGSVRVFDARSHQLRHTVQAEQGLGPMRFSHDGRYGIVLNTLENQALV 367

Query: 77  MDVATRKIIKELPSGKDPEQ 96
           +D +T K+I  +P   +P Q
Sbjct: 368 IDASTDKLIHHIPVAAEPYQ 387