Pairwise Alignments
Query, 319 a.a., membrane protein from Pseudomonas simiae WCS417
Subject, 340 a.a., conserved hypothetical protein containing WD40/YVTN repeat domain from Pseudomonas putida KT2440
Score = 96.7 bits (239), Expect = 7e-25
Identities = 70/238 (29%), Positives = 117/238 (49%), Gaps = 13/238 (5%)
Query: 49 GQRPRGLLLSHDNKLLYICASDSDRVQVMDVATRKIIKELPSGKDPEQFALHPNNRWLYV 108
G P ++ ++ S ++RV++ D+ R + +P+G+ P L P+ R LY+
Sbjct: 111 GDHPAHVITDVTGLRAFVTDSAANRVRIFDLEQRIELPGIPTGRYPHGLRLSPDGRTLYI 170
Query: 109 SNEDDALVTVIDTETAKVLGQINVGVEPEGMAVSPDGKWAVNTSETTNMLHWIDTSTQTL 168
+N V++ID T K QI VG P + +PDG+ A + TN L IDT+ + +
Sbjct: 171 ANMKSDSVSLIDVVTLKETAQIPVGKGPVQVGFAPDGRLAFVSLSATNQLGIIDTARRKV 230
Query: 169 ADSTLVDQRPRFVEFNHDGSQLWASAEIGG-----TVTILDVASRAILKTLTFSIKGVHP 223
V + P + DG Q++ + + G V+I+D+ +R+ L T+T KG H
Sbjct: 231 IGKVDVGRTPIQMMATVDGRQVYVANQGSGQNPDDRVSIVDIQTRSSLGTVTTG-KGAH- 288
Query: 224 DKVQPVGIKLSADGKYGFVALGPANHVAVIDAKTFEVLDYLLVGRRVWQMAFTPDEKQ 281
G+ +S+DG Y FV+ A V+VID + +V+ VG ++F P Q
Sbjct: 289 ------GVAISSDGAYVFVSNIEAGTVSVIDTSSRKVVATHKVGAGPNGISFEPPSAQ 340
Score = 91.3 bits (225), Expect = 3e-23
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 22 AWVSNEKDNSLSLIDMQTLQVTDTLKVGQRPRGLLLSHDNKLLYICASDSDRVQVMDVAT 81
A+V++ N + + D++ + G+ P GL LS D + LYI SD V ++DV T
Sbjct: 126 AFVTDSAANRVRIFDLEQRIELPGIPTGRYPHGLRLSPDGRTLYIANMKSDSVSLIDVVT 185
Query: 82 RKIIKELPSGKDPEQFALHPNNRWLYVSNEDDALVTVIDTETAKVLGQINVGVEPEGMAV 141
K ++P GK P Q P+ R +VS + +IDT KV+G+++VG P M
Sbjct: 186 LKETAQIPVGKGPVQVGFAPDGRLAFVSLSATNQLGIIDTARRKVIGKVDVGRTPIQMMA 245
Query: 142 SPDGK--WAVNTSETTN---MLHWIDTSTQTLADSTLVDQRPRFVEFNHDGSQLWASAEI 196
+ DG+ + N N + +D T++ + + V + DG+ ++ S
Sbjct: 246 TVDGRQVYVANQGSGQNPDDRVSIVDIQTRSSLGTVTTGKGAHGVAISSDGAYVFVSNIE 305
Query: 197 GGTVTILDVASRAILKT 213
GTV+++D +SR ++ T
Sbjct: 306 AGTVSVIDTSSRKVVAT 322
Score = 85.9 bits (211), Expect = 1e-21
Identities = 49/174 (28%), Positives = 94/174 (54%), Gaps = 5/174 (2%)
Query: 21 TAWVSNEKDNSLSLIDMQTLQVTDTLKVGQRPRGLLLSHDNKLLYICASDSDRVQVMDVA 80
T +++N K +S+SLID+ TL+ T + VG+ P + + D +L ++ S ++++ ++D A
Sbjct: 167 TLYIANMKSDSVSLIDVVTLKETAQIPVGKGPVQVGFAPDGRLAFVSLSATNQLGIIDTA 226
Query: 81 TRKIIKELPSGKDPEQFALHPNNRWLYVSNE-----DDALVTVIDTETAKVLGQINVGVE 135
RK+I ++ G+ P Q + R +YV+N+ D V+++D +T LG + G
Sbjct: 227 RRKVIGKVDVGRTPIQMMATVDGRQVYVANQGSGQNPDDRVSIVDIQTRSSLGTVTTGKG 286
Query: 136 PEGMAVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLVDQRPRFVEFNHDGSQ 189
G+A+S DG + ++ + IDTS++ + + V P + F +Q
Sbjct: 287 AHGVAISSDGAYVFVSNIEAGTVSVIDTSSRKVVATHKVGAGPNGISFEPPSAQ 340
Score = 82.8 bits (203), Expect = 1e-20
Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 29/334 (8%)
Query: 6 LSCALLLAAGHAVAS---TAWVSNEKDNSLSLIDMQTLQVTDTLKVGQRPRGLLLSHDNK 62
L +LL+ G +A+ + +NE+ S+S +++ T V+ T+ + P L +S D
Sbjct: 12 LGISLLIPLGLVMANPTGNVYTANERSASISQVNLATGDVS-TVALPIAPHNLQVSPDGS 70
Query: 63 LLYIC---------ASDSDRVQVMDVATRKIIK---ELPSGKDPEQFALHPNNRWLYVSN 110
LL + + + Q++ +T + + P+G P +V++
Sbjct: 71 LLLVVGVAGHAGHSSGEKPGGQLLVFSTSALDRPPFSFPAGDHPAHVITDVTGLRAFVTD 130
Query: 111 EDDALVTVIDTETAKVLGQINVGVEPEGMAVSPDGKWAVNTSETTNMLHWIDTSTQTLAD 170
V + D E L I G P G+ +SPDG+ + ++ + ID T
Sbjct: 131 SAANRVRIFDLEQRIELPGIPTGRYPHGLRLSPDGRTLYIANMKSDSVSLIDVVTLKETA 190
Query: 171 STLVDQRPRFVEFNHDGSQLWASAEIGGTVTILDVASRAILKTLTFSIKGVHPDKVQPVG 230
V + P V F DG + S + I+D A R ++ + P+
Sbjct: 191 QIPVGKGPVQVGFAPDGRLAFVSLSATNQLGIIDTARRKVIGKVDVGRT--------PIQ 242
Query: 231 IKLSADGKYGFVA-----LGPANHVAVIDAKTFEVLDYLLVGRRVWQMAFTPDEKQLLVT 285
+ + DG+ +VA P + V+++D +T L + G+ +A + D + V+
Sbjct: 243 MMATVDGRQVYVANQGSGQNPDDRVSIVDIQTRSSLGTVTTGKGAHGVAISSDGAYVFVS 302
Query: 286 NGVSGDVSVIDVDSLKVIKSVKVGRYPWGVVVTP 319
N +G VSVID S KV+ + KVG P G+ P
Sbjct: 303 NIEAGTVSVIDTSSRKVVATHKVGAGPNGISFEP 336