Pairwise Alignments

Query, 390 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 397 a.a., putative ABC transporter, substrate-binding protein from Pseudomonas putida KT2440

 Score =  654 bits (1686), Expect = 0.0
 Identities = 326/398 (81%), Positives = 356/398 (89%), Gaps = 9/398 (2%)

Query: 1   MRQLAPYAVICLLAIAW--------AANGQAAEAPLQVQIGYLGYRPDPGPLLSNVIPEP 52
           MRQ A  A+ CLLA+A         AA GQAA APL ++IGYLGYRP  GPLLSN+IPEP
Sbjct: 1   MRQPAHLALTCLLALAATLATPLAPAAQGQAA-APLHIRIGYLGYRPAAGPLLSNIIPEP 59

Query: 53  ADAGQRGAELAIIDSNSTGAFLNQRYSLTTATVDTPDALLAAAQAQHAQGLRLFVVNAPA 112
            DAG +GAELAI+DSNSTG FL Q++ LT+A VD+P+ALL AA+AQH QGLR+FVVNAPA
Sbjct: 60  GDAGLQGAELAIVDSNSTGRFLKQQFQLTSANVDSPEALLQAARAQHDQGLRVFVVNAPA 119

Query: 113 ASLRQLSAALPDSLLFNAGSPDDSLRSTACLGNVLHTLPSRAMLADALAQFLVVRKWQKA 172
           ASLR LSAALPDSLLFNAGSPDDSLRS+ CLGNVLH+LPSRAMLADALAQFLV+RKWQ+A
Sbjct: 120 ASLRALSAALPDSLLFNAGSPDDSLRSSQCLGNVLHSLPSRAMLADALAQFLVLRKWQRA 179

Query: 173 LLIVGPTEDDQAYAAALRRAAKRFGVQWVAEKAWRFDNDQRRSAQADMPLFTQTAEYDVV 232
           LL+VG T DDQAYAAALRR+ KRFGVQ VAEK W FDNDQRRSAQADMPLFTQTAEYDVV
Sbjct: 180 LLVVGQTPDDQAYAAALRRSVKRFGVQLVAEKTWTFDNDQRRSAQADMPLFTQTAEYDVV 239

Query: 233 LVADERGDFGEYVPYQTWYPRPVAGTQGLTPTGWHKTVETYGAAQLQKRFEALAGRWMND 292
           LVADERGDFGEY+PYQTWYPRPVAGTQGLTPTGWHKTVET+GAAQLQKRFEA AGRWMND
Sbjct: 240 LVADERGDFGEYLPYQTWYPRPVAGTQGLTPTGWHKTVETFGAAQLQKRFEAQAGRWMND 299

Query: 293 RDFAAWMAVRSIASAVSKLRQVEPMAIRQLEISEQLPLDGFKGRKLSYRPWNGQLRQPIP 352
           RDFAAWMAVRS+ASA SKLR  EP A++QL +SEQLPLDGFKGRKLSYRPWNG+LRQPIP
Sbjct: 300 RDFAAWMAVRSVASAASKLRLAEPRALQQLLLSEQLPLDGFKGRKLSYRPWNGELRQPIP 359

Query: 353 IVQPRALVSTSPQDGFLHPTNEMDSLGYDKPEVTCRFP 390
           +VQPRALVSTSPQ+GFLHP NEMDSLGYDKPEVTC +P
Sbjct: 360 LVQPRALVSTSPQEGFLHPFNEMDSLGYDKPEVTCSYP 397