Pairwise Alignments

Query, 283 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 307 a.a., ABC transporter membrane spanning protein (glycine betaine/L-proline) from Agrobacterium fabrum C58

 Score =  216 bits (550), Expect = 5e-61
 Identities = 124/281 (44%), Positives = 179/281 (63%), Gaps = 11/281 (3%)

Query: 8   FSIADWVNGWVDSLVTNYGDVFRHISDTLLWAIVNL----EGLLRAAPWWLMLAIVGGVA 63
           F I  W+   V  +  N   +F  I     W I NL    + +L A P+ + L +   +A
Sbjct: 10  FPIDAWIADGVQWIALNLRPLFVAIK----WPIENLLAFNDHILHAIPFPIFLVLSFLIA 65

Query: 64  WHATRKVVTTAVIVGLLFLV-GAVGLWDKLMQTLALMMVATVISVLIGVPLGILSARSNR 122
           +      +  A+   + F+V  ++G+WD+ M TL+L+  A VIS +IG+P+GI  A +N 
Sbjct: 66  YRLASLGI--AIFTAISFVVIASLGVWDESMTTLSLISTAIVISTVIGIPVGIWCAINNS 123

Query: 123 LRSVLMPLLDIMQTMPSFVYLIPVLMLFGLGKVPAIFATVIYAAPPLIRLTDLGIRQVDG 182
           +  V+ P+LDIMQT P+FVYL+PV+MLFG+G VP   A VI AAPPLIR T+LGIR V+ 
Sbjct: 124 VWQVVRPVLDIMQTTPTFVYLVPVVMLFGVGTVPGEVAVVIAAAPPLIRFTNLGIRMVET 183

Query: 183 EVMEAINAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSMVVIASMIGARGLGEDVL 242
           E++EA  AFGA+R Q L+ +Q PLA+P+I+ G+NQT + A+ M V+ +MIGA GLG  VL
Sbjct: 184 EMVEAGLAFGADRRQLLWEIQFPLAIPTILGGLNQTVLTAMVMSVVVAMIGAEGLGLVVL 243

Query: 243 VGIQTLNVGRGLEAGLAIVILAVVIDRITQAYGRPRHEASK 283
            G+  L+VGR    G+AI++LA+++DRITQ    P    +K
Sbjct: 244 QGLGRLDVGRAAVGGIAIILLAMILDRITQKLAMPATSKAK 284